RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 RRADP55042 308 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 CD83Q01151 205 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 LRSAM1Q6UWE0 723 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 ERCC4Q92889 916 aaPredicted RBP7.91□□□□□ -1.14
MDM2-220ENST00000496959 DVL3Q92997 716 aaPredicted RBP7.91□□□□□ -1.14
MDM2-220ENST00000496959 C1QTNF3Q9BXJ4 246 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 MEGF9Q9H1U4 602 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 PIF1Q9H611 641 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 MYRFQ9Y2G1 1151 aa7.91□□□□□ -1.14
MDM2-220ENST00000496959 RASSF10A6NK89 507 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 INSRRP14616 1297 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 RANGAP1P46060 587 aaPredicted RBP7.9□□□□□ -1.14
MDM2-220ENST00000496959 RAC3P60763 192 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 PABPC4Q13310 644 aaKnown RBP eCLIP7.9□□□□□ -1.14
MDM2-220ENST00000496959 ICAM4Q14773 271 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 TCEA2Q15560 299 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 CATSPEREQ5SY80 951 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 PIK3R6Q5UE93 754 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 E2F7Q96AV8 911 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 LRRC37BQ96QE4 947 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 DEF6Q9H4E7 631 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 CDC42EP3Q9UKI2 254 aa7.9□□□□□ -1.14
MDM2-220ENST00000496959 A0A0G2JNJ9 132 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 ZNF20P17024 532 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 FNTBP49356 437 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 KIF11P52732 1056 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 MOGSQ13724 837 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 ZNF460Q14592 562 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 EIF4HQ15056 248 aaKnown RBP7.89□□□□□ -1.15
MDM2-220ENST00000496959 KANK2Q63ZY3 851 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 GRAMD4Q6IC98 578 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 GGNQ86UU5 652 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 HOMER1Q86YM7 354 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 GIMAP8Q8ND71 665 aaPredicted RBP7.89□□□□□ -1.15
MDM2-220ENST00000496959 DNERQ8NFT8 737 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 NEIL1Q96FI4 390 aaPredicted RBP7.89□□□□□ -1.15
MDM2-220ENST00000496959 ACSS2Q9NR19 701 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 Q9UFV3 132 aa7.89□□□□□ -1.15
MDM2-220ENST00000496959 PTPDC1A2A3K4 754 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 PATE3B3GLJ2 98 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 H7C1D1 291 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 JMJD7P0C870 316 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 SDSP20132 328 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 APEX1P27695 318 aaKnown RBP7.88□□□□□ -1.15
MDM2-220ENST00000496959 ZNF174Q15697 407 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 TMEM200BQ69YZ2 307 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 CDK5RAP1Q96SZ6 601 aaKnown RBP7.88□□□□□ -1.15
MDM2-220ENST00000496959 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 PCIF1Q9H4Z3 704 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
MDM2-220ENST00000496959 TCAF1Q9Y4C2 921 aa7.88□□□□□ -1.15
MDM2-220ENST00000496959 TRAF5O00463 557 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 ZNF623O75123 536 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 MEOX1P50221 254 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 ALDH6A1Q02252 535 aaKnown RBP7.87□□□□□ -1.15
MDM2-220ENST00000496959 MAP3K12Q12852 859 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 CFAP100Q494V2 611 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 CDCA2Q69YH5 1023 aaPredicted RBP7.87□□□□□ -1.15
MDM2-220ENST00000496959 TAX1BP1Q86VP1 789 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 RTKN2Q8IZC4 609 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 APPBP2Q92624 585 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 RNPC3Q96LT9 517 aaKnown RBP7.87□□□□□ -1.15
MDM2-220ENST00000496959 GNRHR2Q96P88 292 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 CD248Q9HCU0 757 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 INTS7Q9NVH2 962 aaKnown RBP7.87□□□□□ -1.15
MDM2-220ENST00000496959 NR2E1Q9Y466 385 aa7.87□□□□□ -1.15
MDM2-220ENST00000496959 CYP17A1P05093 508 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 PUM1Q14671 1186 aaKnown RBP eCLIP7.86□□□□□ -1.15
MDM2-220ENST00000496959 HS1BP3Q53T59 392 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 USP30Q70CQ3 517 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 LARP4Q71RC2 724 aaKnown RBP eCLIP7.86□□□□□ -1.156e-8■■□□□ 12.3
MDM2-220ENST00000496959 FOXRED1Q96CU9 486 aaPredicted RBP7.86□□□□□ -1.15
MDM2-220ENST00000496959 FOXB1Q99853 325 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 KLC2Q9H0B6 622 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 B4GALT6Q9UBX8 382 aa7.86□□□□□ -1.15
MDM2-220ENST00000496959 C1QTNF3-AMACRE9PGA6 284 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 CBX4O00257 560 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 ARHGAP6O43182 974 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 CR2P20023 1033 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 NFYCQ13952 458 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 PCOLCEQ15113 449 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 AGBL4Q5VU57 503 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 TRIM68Q6AZZ1 485 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 TCTN3Q6NUS6 607 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 ZNF585AQ6P3V2 769 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 C16orf86Q6ZW13 317 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 RTN4RL1Q86UN2 441 aaPredicted RBP7.85□□□□□ -1.15
MDM2-220ENST00000496959 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
MDM2-220ENST00000496959 ZFR2Q9UPR6 939 aaKnown RBP7.85□□□□□ -1.15
MDM2-220ENST00000496959 DVL2O14641 736 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 MAFO75444 373 aaPredicted RBP7.84□□□□□ -1.15
MDM2-220ENST00000496959 SELENOPP49908 381 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 MRE11P49959 708 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 ROM1Q03395 351 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 NOLC1Q14978 699 aaKnown RBP eCLIP7.84□□□□□ -1.15
MDM2-220ENST00000496959 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 KIAA1958Q8N8K9 716 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 Q8TCH9 128 aa7.84□□□□□ -1.15
MDM2-220ENST00000496959 KRTAP4-11Q9BYQ6 195 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms