RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
SHANK2-210ENST00000449116 CRISPLD2Q9H0B8 497 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 RNPEPQ9H4A4 650 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 ARHGEF35A5YM69 484 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 DNM1LO00429 736 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHANK2-210ENST00000449116 ACLYP53396 1101 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 SLC12A3P55017 1021 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 KLHL40Q2TBA0 621 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
SHANK2-210ENST00000449116 XKR9Q5GH70 373 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 CYP26B1Q9NR63 512 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 PPME1Q9Y570 386 aa16.31■□□□□ 0.2
SHANK2-210ENST00000449116 GJA8P48165 433 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 NPEPPSP55786 919 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 AMPD3Q01432 767 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 DHX8Q14562 1220 aaKnown RBP16.3■□□□□ 0.2
SHANK2-210ENST00000449116 TARBP2Q15633 366 aaKnown RBP16.3■□□□□ 0.2
SHANK2-210ENST00000449116 MTERF2Q49AM1 385 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 ZNF484Q5JVG2 852 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 ELOA2Q8IYF1 753 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-210ENST00000449116 PAGE5Q96GU1 130 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 PHF24Q9UPV7 400 aa16.3■□□□□ 0.2
SHANK2-210ENST00000449116 COL1A2P08123 1366 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 TRAK2O60296 914 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 TFRCP02786 760 aaKnown RBP16.29■□□□□ 0.2
SHANK2-210ENST00000449116 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 INSRRP14616 1297 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 CAPN2P17655 700 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 AFMP43652 599 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 PPFIA1Q13136 1202 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 GPBP1Q86WP2 473 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 STAMQ92783 540 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 MTRQ99707 1265 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 KCND2Q9NZV8 630 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
SHANK2-210ENST00000449116 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
SHANK2-210ENST00000449116 NRCAMQ92823 1304 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 A0A1W2PQ45 241 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-210ENST00000449116 A0A1W2PQY0 241 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 RRN3P2A6NIE6 340 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 DGAT1O75907 488 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 MYL1P05976 194 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 CYP11B2P19099 503 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 RFC5P40937 340 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 GRIK4Q16099 956 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 C1orf186Q6ZWK4 172 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 GRAMD1CQ8IYS0 662 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 C7orf31Q8N865 590 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 RUSC1Q9BVN2 902 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 NUP62CLQ9H1M0 184 aa16.28■□□□□ 0.2
SHANK2-210ENST00000449116 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-210ENST00000449116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 MYMKA6NI61 221 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 USO1O60763 962 aaKnown RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 IGBP1P78318 339 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 POSTNQ15063 836 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 ARSHQ5FYA8 562 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 EXOC8Q8IYI6 725 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 ANKLE1Q8NAG6 615 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 TRIM9Q9C026 710 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.2
SHANK2-210ENST00000449116 ATP6V0A4Q9HBG4 840 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 STARD7Q9NQZ5 370 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 SETD4Q9NVD3 440 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
SHANK2-210ENST00000449116 BRCA2P51587 3418 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 C17orf102A2RUQ5 167 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 MAGEB2O15479 319 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 MAFO75444 373 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 GNAT1P11488 350 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms