RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 E9PCH4 1651 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 TET3O43151 1660 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 MSCO60682 206 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
PMS1-202ENST00000374826 RASGRF1Q13972 1273 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 RSPO2Q6UXX9 243 aaPredicted RBP6.49□□□□□ -1.37
PMS1-202ENST00000374826 NSMFQ6X4W1 530 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 SPATC1Q76KD6 591 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 PROSER1Q86XN7 944 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 DCAF4Q8WV16 495 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 OSBP2Q969R2 916 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 SPATA9Q9BWV2 254 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 SPHKAPQ2M3C7 1700 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 IQGAP3Q86VI3 1631 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 ABCC3O15438 1527 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 ERBINQ96RT1 1412 aa6.49□□□□□ -1.37
PMS1-202ENST00000374826 POLR1AO95602 1720 aaPredicted RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 DHX29Q7Z478 1369 aaKnown RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 ANKRD30AQ9BXX3 1397 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 MAFKO60675 156 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 KLHL18O94889 574 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 NTRK3Q16288 839 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 YOD1Q5VVQ6 348 aaPredicted RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 TRIM48Q8IWZ4 208 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 ARMC5Q96C12 935 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 HIRIP3Q9BW71 556 aaPredicted RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 SEC61A2Q9H9S3 476 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 SIRPGQ9P1W8 387 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 PPARGC1AQ9UBK2 798 aaKnown RBP6.48□□□□□ -1.37
PMS1-202ENST00000374826 ASH2LQ9UBL3 628 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 FAM135AQ9P2D6 1515 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
PMS1-202ENST00000374826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.47□□□□□ -1.37
PMS1-202ENST00000374826 CNOT4O95628 575 aaKnown RBP6.47□□□□□ -1.37
PMS1-202ENST00000374826 KLF10Q13118 480 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 CYP4F22Q6NT55 531 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 Q6ZUG5 572 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 CLEC4DQ8WXI8 215 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 SLC6A20Q9NP91 592 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 RRP7BPQ9NSQ0 103 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 PFDN2Q9UHV9 154 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 VWDEQ8N2E2 1590 aa6.47□□□□□ -1.37
PMS1-202ENST00000374826 KIF1BO60333 1816 aa6.46□□□□□ -1.37
PMS1-202ENST00000374826 BLACEA4D250 179 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 KRIT1O00522 736 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 KIF3BO15066 747 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 CHGBP05060 677 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 SSRP1Q08945 709 aaKnown RBP6.46□□□□□ -1.38
PMS1-202ENST00000374826 PHF19Q5T6S3 580 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 GGT6Q6P531 493 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 DTX3Q8N9I9 347 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 TTLL11Q8NHH1 800 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 ZFYVE21Q9BQ24 234 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 JAM3Q9BX67 310 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 DLL4Q9NR61 685 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 CNTLNQ9NXG0 1405 aa6.46□□□□□ -1.38
PMS1-202ENST00000374826 EFCAB6Q5THR3 1501 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 ROCK1Q13464 1354 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 UBR1Q8IWV7 1749 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 ANKRD50Q9ULJ7 1429 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 STRCQ7RTU9 1775 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 ADCY3O60266 1144 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 CKMP06732 381 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 GRK2P25098 689 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 GRK3P35626 688 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 SERINC3Q13530 473 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
PMS1-202ENST00000374826 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 VASNQ6EMK4 673 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 STYK1Q6J9G0 422 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 TCTN3Q6NUS6 607 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 IFNL3Q8IZI9 196 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 AJUBAQ96IF1 538 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 GNRHR2Q96P88 292 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 ING1Q9UK53 422 aaPredicted RBP6.45□□□□□ -1.38
PMS1-202ENST00000374826 SLC4A7Q9Y6M7 1214 aa6.45□□□□□ -1.38
PMS1-202ENST00000374826 CEP170BQ9Y4F5 1589 aaPredicted RBP6.44□□□□□ -1.38
PMS1-202ENST00000374826 PIK3C2BO00750 1634 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 SLC27A2O14975 620 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 FOXS1O43638 330 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 KNG1P01042 644 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 GPR85P60893 370 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 GRIN1Q05586 938 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 RBL2Q08999 1139 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 RASA3Q14644 834 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 HS1BP3Q53T59 392 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 RALYLQ86SE5 291 aaKnown RBP6.44□□□□□ -1.38
PMS1-202ENST00000374826 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.44□□□□□ -1.38
PMS1-202ENST00000374826 PIP4K2CQ8TBX8 421 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 CDC6Q99741 560 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 ZNF341Q9BYN7 854 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms