RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DISP1Q96F81 1524 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 BIRC5O15392 142 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TBC1D12O60347 775 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZCCHC18P0CG32 403 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 GNA11P29992 359 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ITGA9Q13797 1035 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MYBPC2Q14324 1141 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 FLCNQ8NFG4 579 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 UHMK1Q8TAS1 419 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 NLRC4Q9NPP4 1024 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZNF212Q9UDV6 495 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 INHBAP08476 426 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 EIF4A3P38919 411 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 PTH1RQ03431 593 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZNF174Q15697 407 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZBTB8BQ8NAP8 495 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 FOXP1Q9H334 677 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 NLRP2Q9NX02 1062 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 FAM53CQ9NYF3 392 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 BCORL1Q5H9F3 1711 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZPR1O75312 459 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 SYF2O95926 243 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 PYGLP06737 847 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 SLC34A1Q06495 639 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MTHFD1LQ6UB35 978 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PLEKHG4BQ96PX9 1271 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 GOLPH3LQ9H4A5 285 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 WARS2Q9UGM6 360 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 LGALS16A8MUM7 142 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ESCO1Q5FWF5 840 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 NFRKBQ6P4R8 1299 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ZNF579Q8NAF0 562 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 AGAP11Q8TF27 550 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 CENPTQ96BT3 561 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 LZTS2Q9BRK4 669 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ANAPC5Q9UJX4 755 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 A0A087WWV3 80 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 E7EWF7 191 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 POC1B-GALNT4F8VUJ3 575 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 HNRNPRO43390 633 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 PPARGP37231 505 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 NR1I3Q14994 352 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MAN2A1Q16706 1144 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 METTL24Q5JXM2 366 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 GPR141Q7Z602 305 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TMEM110Q86TL2 294 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TRIM50Q86XT4 487 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 POLR3CQ9BUI4 534 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 CYP39A1Q9NYL5 469 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 AIPL1Q9NZN9 384 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PPARGC1AQ9UBK2 798 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 AGTPBP1Q9UPW5 1226 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ANGPTL3Q9Y5C1 460 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TRPM2O94759 1503 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PZPP20742 1482 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 IQANK1A0A1B0GTG1 560 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 FKBP6O75344 327 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ACTN1P12814 892 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ART3Q13508 389 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ADCK5Q3MIX3 580 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 RABGAP1LQ5R372 815 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 LRRC8BQ6P9F7 803 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 C1orf228Q6PIY5 440 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 USHBP1Q8N6Y0 703 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 RAD21L1Q9H4I0 556 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 C6orf203Q9P0P8 240 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 TBK1Q9UHD2 729 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 APOBEC2Q9Y235 224 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 SNX5Q9Y5X3 404 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 GOLGA8IPA6NC78 632 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 H0Y626 953 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TNFAIP8O95379 198 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 FTCDO95954 541 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ARL1P40616 181 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 GRIK3Q13003 919 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 LRRC74BQ6ZQY2 392 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MARK2Q7KZI7 788 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 TRMT10CQ7L0Y3 403 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 MTA3Q9BTC8 594 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 IRX2Q9BZI1 471 aaPredicted RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 KLHL4Q9C0H6 718 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PLGRKTQ9HBL7 147 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 AREL1O15033 823 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 CDC37Q16543 378 aaPredicted RBP5.38□□□□□ -1.55
SKP1-202ENST00000353411 C11orf91Q3C1V1 193 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 SYCP2LQ5T4T6 812 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 GPIHBP1Q8IV16 184 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 SIX5Q8N196 739 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 SPATA7Q9P0W8 599 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 UBE4BO95155 1302 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 RBM47A0AV96 593 aaKnown RBP5.38□□□□□ -1.55
SKP1-202ENST00000353411 ESYT3A0FGR9 886 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 ASNA1O43681 348 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 PALMO75781 387 aa5.38□□□□□ -1.55
SKP1-202ENST00000353411 XRCC5P13010 732 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms