RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 AURKCQ9UQB9 309 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 SRRM1Q8IYB3 904 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 THNSL1Q8IYQ7 743 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 PIK3R5Q8WYR1 880 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 MRPL47Q9HD33 250 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 E5RI56 91 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 TRIM37O94972 964 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 KRT4P19013 534 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 DYNLL1P63167 89 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 NDFIP2Q9NV92 336 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 PYGBP11216 843 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 CACNB2Q08289 660 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 OSBPL1AQ9BXW6 950 aa13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 NOP53Q9NZM5 478 aaKnown RBP13.33□□□□□ -0.28
ARFGEF1-201ENST00000262215 LRRC74AQ0VAA2 488 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 DEPDC1Q5TB30 811 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 ERICH1Q86X53 443 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 DAB1O75553 588 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 ACAD11Q709F0 780 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 WDR75Q8IWA0 830 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PIGSQ96S52 555 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 TUBB6Q9BUF5 446 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 MAN1B1Q9UKM7 699 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 EFTUD2Q15029 972 aaKnown RBP eCLIP13.32□□□□□ -0.285e-7■■■■■ 27.1
ARFGEF1-201ENST00000262215 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 CASP8Q14790 479 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PRR23D1E9PI22 279 aaPredicted RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 PRR23D2P0DMB1 279 aaPredicted RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
ARFGEF1-201ENST00000262215 RECQLP46063 649 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 COPS2P61201 443 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 NR5A1Q13285 461 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 TAS2R42Q7RTR8 314 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 PCSK1NQ9UHG2 260 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ZNF233A6NK53 670 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 WDR47O94967 919 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ADORA1P30542 326 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 PWP1Q13610 501 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ARL13BQ3SXY8 428 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 PFKFB2O60825 505 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 MOCS2O96007 188 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 BRD2P25440 801 aaKnown RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 STK17AQ9UEE5 414 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.281e-10■■■□□ 16.5
ARFGEF1-201ENST00000262215 EPM2AIP1Q7L775 607 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 PPM1NQ8N819 430 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 IP6K1Q92551 441 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 USP6NLQ92738 828 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 CNOT10Q9H9A5 744 aaKnown RBP13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 CENPAP49450 140 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 DBNDD1Q9H9R9 158 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ASXL1Q8IXJ9 1541 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 MYL3P08590 195 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 PAMP19021 973 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
ARFGEF1-201ENST00000262215 ATP5JP18859 108 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 MXI1P50539 228 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 PSMD2Q13200 908 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 MMS22LQ6ZRQ5 1243 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 CCHCR1Q8TD31 782 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 PHF21AQ96BD5 680 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 MSTO1Q9BUK6 570 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 AMNQ9BXJ7 453 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 KCNQ3O43525 872 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 CHRNDQ07001 517 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 NME3Q13232 169 aa13.3□□□□□ -0.28
ARFGEF1-201ENST00000262215 MAN2A1Q16706 1144 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms