RNA–Protein interactions for RNA: ENST00000229270.8

TPI1-201, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-201ENST00000229270 TRAF3IP3Q9Y228 551 aa28.79■■■□□ 2.2
TPI1-201ENST00000229270 ASTN2O75129 1339 aaPredicted RBP28.79■■■□□ 2.2
TPI1-201ENST00000229270 CTNND1O60716 968 aaKnown RBP28.78■■■□□ 2.2
TPI1-201ENST00000229270 PHACTR2O75167 634 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 SLC12A3P55017 1021 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 APBA1Q02410 837 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 HERC4Q5GLZ8 1057 aaPredicted RBP28.78■■■□□ 2.2
TPI1-201ENST00000229270 LRRC31Q6UY01 552 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 SRLQ86TD4 932 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 FAM76AQ8TAV0 307 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 GANQ9H2C0 597 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 DMGDHQ9UI17 866 aaKnown RBP28.78■■■□□ 2.2
TPI1-201ENST00000229270 SREBF1P36956 1147 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 Q4G0T1 1027 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 DEFB129Q9H1M3 183 aa28.78■■■□□ 2.2
TPI1-201ENST00000229270 GPBP1L1Q9HC44 474 aaPredicted RBP28.78■■■□□ 2.2
TPI1-201ENST00000229270 SCAF8Q9UPN6 1271 aaKnown RBP28.78■■■□□ 2.2
TPI1-201ENST00000229270 E9PMD0 336 aa28.77■■■□□ 2.2
TPI1-201ENST00000229270 PPFIA4O75335 1185 aa28.77■■■□□ 2.2
TPI1-201ENST00000229270 ZMYND10O75800 440 aa28.77■■■□□ 2.2
TPI1-201ENST00000229270 POLR2FP61218 127 aaKnown RBP28.77■■■□□ 2.2
TPI1-201ENST00000229270 ARHGAP4P98171 946 aa28.77■■■□□ 2.2
TPI1-201ENST00000229270 PPFIA1Q13136 1202 aa28.77■■■□□ 2.2
TPI1-201ENST00000229270 USP50Q70EL3 339 aaPredicted RBP28.77■■■□□ 2.2
TPI1-201ENST00000229270 SND1Q7KZF4 910 aaKnown RBP eCLIP28.77■■■□□ 2.2
TPI1-201ENST00000229270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.77■■■□□ 2.21e-9■■■■■ 80.2
TPI1-201ENST00000229270 ASIC2Q16515 512 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 C8orf74Q6P047 294 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 IFT20Q8IY31 132 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 EIF1ADQ8N9N8 165 aaKnown RBP28.76■■■□□ 2.19
TPI1-201ENST00000229270 FBXL5Q9UKA1 691 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 DOCK1Q14185 1865 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 SMCHD1A6NHR9 2005 aa28.76■■■□□ 2.19
TPI1-201ENST00000229270 POTEIP0CG38 1075 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 POTEJP0CG39 1038 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 CIITAP33076 1130 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 ADAM9Q13443 819 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 MEI1Q5TIA1 1274 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 DRC1Q96MC2 740 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 ZNF341Q9BYN7 854 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 KIAA1683Q9H0B3 1180 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 NLRC4Q9NPP4 1024 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 GDF3Q9NR23 364 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 SPDYE3A6NKU9 549 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 SSBP05455 408 aaKnown RBP eCLIP28.75■■■□□ 2.19
TPI1-201ENST00000229270 ZYXQ15942 572 aaKnown RBP28.75■■■□□ 2.19
TPI1-201ENST00000229270 IFI16Q16666 785 aaKnown RBP28.75■■■□□ 2.19
TPI1-201ENST00000229270 EAPPQ56P03 285 aaPredicted RBP28.75■■■□□ 2.19
TPI1-201ENST00000229270 LPAR1Q92633 364 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 FAM20AQ96MK3 541 aa28.75■■■□□ 2.19
TPI1-201ENST00000229270 GOLGA6CA6NDK9 693 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 CYP3A4P08684 503 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 GOLGA6DP0CG33 693 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 KLHL30Q0D2K2 578 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 BMT2Q1RMZ1 405 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 EPM2AIP1Q7L775 607 aaPredicted RBP28.74■■■□□ 2.19
TPI1-201ENST00000229270 PNMA8AQ86V59 439 aaPredicted RBP28.74■■■□□ 2.19
TPI1-201ENST00000229270 APOBEC3FQ8IUX4 373 aaKnown RBP28.74■■■□□ 2.19
TPI1-201ENST00000229270 SYT2Q8N9I0 419 aaPredicted RBP28.74■■■□□ 2.19
TPI1-201ENST00000229270 ETNPPLQ8TBG4 499 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 GOLGA6AQ9NYA3 693 aa28.74■■■□□ 2.19
TPI1-201ENST00000229270 POTEB3A0JP26 581 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 PDXKO00764 312 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 WDR46O15213 610 aaKnown RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 TAL1P17542 331 aaPredicted RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 RPA1P27694 616 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 ARSHQ5FYA8 562 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 DCAF15Q66K64 600 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 POTEBQ6S5H4 581 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 MREGQ8N565 214 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 ZNF784Q8NCA9 323 aaPredicted RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 HDAC7Q8WUI4 952 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 METTL14Q9HCE5 456 aaKnown RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 FEZ2Q9UHY8 353 aaPredicted RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 ZNF112Q9UJU3 913 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 MRPL11Q9Y3B7 192 aaKnown RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 RRP15Q9Y3B9 282 aaKnown RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 CALUO43852 315 aaPredicted RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 SPIRE1Q08AE8 756 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 NBPF12Q5TAG4 269 aaPredicted RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 GSPT2Q8IYD1 628 aaKnown RBP28.73■■■□□ 2.19
TPI1-201ENST00000229270 TBC1D5Q92609 795 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 HOOK2Q96ED9 719 aa28.73■■■□□ 2.19
TPI1-201ENST00000229270 SLC16A3O15427 465 aaKnown RBP28.72■■■□□ 2.19
TPI1-201ENST00000229270 MED24O75448 989 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 KCNH2Q12809 1159 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 PAK2Q13177 524 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 KNOP1Q1ED39 458 aaKnown RBP28.72■■■□□ 2.19
TPI1-201ENST00000229270 DPY19L2P1Q6NXN4 242 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 C1orf131Q8NDD1 294 aaKnown RBP28.72■■■□□ 2.19
TPI1-201ENST00000229270 FGFBP2Q9BYJ0 223 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 RBM12Q9NTZ6 932 aaKnown RBP28.72■■■□□ 2.19
TPI1-201ENST00000229270 GGA3Q9NZ52 723 aa28.72■■■□□ 2.19
TPI1-201ENST00000229270 MYO1CO00159 1063 aa28.71■■■□□ 2.19
TPI1-201ENST00000229270 PALMO75781 387 aa28.71■■■□□ 2.19
TPI1-201ENST00000229270 KRT18P05783 430 aaKnown RBP28.71■■■□□ 2.19
TPI1-201ENST00000229270 PRKCIP41743 596 aa28.71■■■□□ 2.19
TPI1-201ENST00000229270 NAP1L1P55209 391 aaKnown RBP28.71■■■□□ 2.19
TPI1-201ENST00000229270 GIT2Q14161 759 aa28.71■■■□□ 2.19
TPI1-201ENST00000229270 ANGEL2Q5VTE6 544 aaKnown RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms