RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A FLP1P03870 423 aa7.44□□□□□ -1.22
TGA1tA(UGC)A GAL3P13045 520 aa7.44□□□□□ -1.22
TGA1tA(UGC)A DAT1P13483 248 aaKnown RBP7.44□□□□□ -1.22
TGA1tA(UGC)A DMC1P25453 334 aa7.44□□□□□ -1.22
TGA1tA(UGC)A HSP150P32478 413 aa7.44□□□□□ -1.22
TGA1tA(UGC)A LHP1P33399 275 aaKnown RBP7.44□□□□□ -1.22
TGA1tA(UGC)A GPI16P38875 610 aa7.44□□□□□ -1.22
TGA1tA(UGC)A HRB1P38922 454 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
TGA1tA(UGC)A RPS26AP39938 119 aaKnown RBP7.44□□□□□ -1.22
TGA1tA(UGC)A RPS26BP39939 119 aaKnown RBP7.44□□□□□ -1.22
TGA1tA(UGC)A ATP25Q03153 612 aa7.44□□□□□ -1.22
TGA1tA(UGC)A CGI121Q03705 181 aaKnown RBP7.44□□□□□ -1.22
TGA1tA(UGC)A ADE5,7P07244 802 aaKnown RBP7.43□□□□□ -1.22
TGA1tA(UGC)A KSS1P14681 368 aa7.43□□□□□ -1.22
TGA1tA(UGC)A NUD1P32336 851 aa7.43□□□□□ -1.22
TGA1tA(UGC)A SWH1P35845 1188 aa7.43□□□□□ -1.22
TGA1tA(UGC)A TSL1P38427 1098 aaKnown RBP7.43□□□□□ -1.22
TGA1tA(UGC)A TRM5P38793 499 aa7.43□□□□□ -1.22
TGA1tA(UGC)A TAT2P38967 592 aa7.43□□□□□ -1.22
TGA1tA(UGC)A SMK1P41808 388 aa7.43□□□□□ -1.22
TGA1tA(UGC)A IRC6P43615 237 aa7.43□□□□□ -1.22
TGA1tA(UGC)A PGU1P47180 361 aa7.43□□□□□ -1.22
TGA1tA(UGC)A BPL1P48445 690 aaPredicted RBP7.43□□□□□ -1.22
TGA1tA(UGC)A PFA5Q03289 374 aa7.43□□□□□ -1.22
TGA1tA(UGC)A NAT4Q04751 285 aa7.43□□□□□ -1.22
TGA1tA(UGC)A DCR2Q05924 578 aa7.43□□□□□ -1.22
TGA1tA(UGC)A OSW1Q08692 278 aa7.43□□□□□ -1.22
TGA1tA(UGC)A MUM3Q08750 479 aa7.43□□□□□ -1.22
TGA1tA(UGC)A RPS21BQ3E754 87 aaKnown RBP7.43□□□□□ -1.22
TGA1tA(UGC)A MDM12Q92328 271 aa7.43□□□□□ -1.22
TGA1tA(UGC)A PHO2P07269 559 aa7.42□□□□□ -1.22
TGA1tA(UGC)A RPP1BP10622 106 aaKnown RBP7.42□□□□□ -1.22
TGA1tA(UGC)A MEF1P25039 761 aa7.42□□□□□ -1.22
TGA1tA(UGC)A ATP7P30902 174 aa7.42□□□□□ -1.22
TGA1tA(UGC)A YPT7P32939 208 aa7.42□□□□□ -1.22
TGA1tA(UGC)A GRE3P38715 327 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
TGA1tA(UGC)A TDA11P38854 504 aa7.42□□□□□ -1.22
TGA1tA(UGC)A DSS1P39112 969 aa7.42□□□□□ -1.22
TGA1tA(UGC)A JEM1P40358 645 aa7.42□□□□□ -1.22
TGA1tA(UGC)A BSC5P53755 489 aa7.42□□□□□ -1.22
TGA1tA(UGC)A CUZ1P53899 274 aa7.42□□□□□ -1.22
TGA1tA(UGC)A YNL033WP53964 284 aa7.42□□□□□ -1.22
TGA1tA(UGC)A YNL019CP53975 284 aa7.42□□□□□ -1.22
TGA1tA(UGC)A CTL1Q03220 320 aaKnown RBP7.42□□□□□ -1.22
TGA1tA(UGC)A INP1Q03694 420 aa7.42□□□□□ -1.22
TGA1tA(UGC)A YLR446WQ06204 433 aa7.42□□□□□ -1.22
TGA1tA(UGC)A DCI1Q08558 271 aa7.42□□□□□ -1.22
TGA1tA(UGC)A RRG7Q08774 242 aaPredicted RBP7.42□□□□□ -1.22
TGA1tA(UGC)A YDL177CQ12257 170 aa7.42□□□□□ -1.22
TGA1tA(UGC)A GPH1P06738 902 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A SSA3P09435 649 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A STE6P12866 1290 aa7.41□□□□□ -1.22
TGA1tA(UGC)A ERD1P16151 362 aa7.41□□□□□ -1.22
TGA1tA(UGC)A KGD1P20967 1014 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A ATS1P31386 333 aa7.41□□□□□ -1.22
TGA1tA(UGC)A ZTA1P38230 334 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A YHR218WP38899 603 aa7.41□□□□□ -1.22
TGA1tA(UGC)A BIT61P47041 543 aa7.41□□□□□ -1.22
TGA1tA(UGC)A KEL2P50090 882 aa7.41□□□□□ -1.22
TGA1tA(UGC)A RPN14P53196 417 aa7.41□□□□□ -1.22
TGA1tA(UGC)A RHO5P53879 331 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A YNL092WP53934 400 aa7.41□□□□□ -1.22
TGA1tA(UGC)A YDR541CQ03049 344 aa7.41□□□□□ -1.22
TGA1tA(UGC)A SVL3Q03088 825 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A YKU80Q04437 629 aa7.41□□□□□ -1.22
TGA1tA(UGC)A ERB1Q04660 807 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A GTB1Q04924 702 aa7.41□□□□□ -1.22
TGA1tA(UGC)A ATG38Q05789 226 aaKnown RBP7.41□□□□□ -1.22
TGA1tA(UGC)A ASA1Q06822 443 aa7.41□□□□□ -1.22
TGA1tA(UGC)A FLO9P39712 1322 aa7.41□□□□□ -1.22
TGA1tA(UGC)A MOD5P07884 428 aa7.4□□□□□ -1.22
TGA1tA(UGC)A ARF1P11076 181 aaKnown RBP7.4□□□□□ -1.22
TGA1tA(UGC)A SEC2P17065 759 aa7.4□□□□□ -1.22
TGA1tA(UGC)A ERG8P24521 451 aa7.4□□□□□ -1.22
TGA1tA(UGC)A CWH43P25618 953 aa7.4□□□□□ -1.22
TGA1tA(UGC)A MRP8P35719 219 aa7.4□□□□□ -1.22
TGA1tA(UGC)A RIB1P38066 345 aa7.4□□□□□ -1.22
TGA1tA(UGC)A NSG1P38837 291 aa7.4□□□□□ -1.22
TGA1tA(UGC)A AST2P39945 430 aaKnown RBP7.4□□□□□ -1.22
TGA1tA(UGC)A MPM1P40364 252 aa7.4□□□□□ -1.22
TGA1tA(UGC)A TOS2P50078 622 aa7.4□□□□□ -1.22
TGA1tA(UGC)A PDR16P53860 351 aaKnown RBP7.4□□□□□ -1.22
TGA1tA(UGC)A GIS1Q03833 894 aa7.4□□□□□ -1.22
TGA1tA(UGC)A ARO10Q06408 635 aa7.4□□□□□ -1.22
TGA1tA(UGC)A RRT8Q08219 342 aa7.4□□□□□ -1.22
TGA1tA(UGC)A YDL211CQ12121 372 aa7.4□□□□□ -1.22
TGA1tA(UGC)A YRM1Q12340 786 aa7.4□□□□□ -1.22
TGA1tA(UGC)A WTM1Q12363 437 aaKnown RBP7.4□□□□□ -1.22
TGA1tA(UGC)A MF(ALPHA)1P01149 165 aa7.39□□□□□ -1.23
TGA1tA(UGC)A RNA1P11745 407 aaKnown RBP7.39□□□□□ -1.23
TGA1tA(UGC)A RPB10P22139 70 aa7.39□□□□□ -1.23
TGA1tA(UGC)A DEP1P31385 405 aa7.39□□□□□ -1.23
TGA1tA(UGC)A TOD6P34219 525 aa7.39□□□□□ -1.23
TGA1tA(UGC)A TEF4P36008 412 aaKnown RBP7.39□□□□□ -1.23
TGA1tA(UGC)A CHS7P38843 316 aa7.39□□□□□ -1.23
TGA1tA(UGC)A MAM33P40513 266 aa7.39□□□□□ -1.23
TGA1tA(UGC)A ARF3P40994 183 aaRIP-Chip data7.39□□□□□ -1.23not detected
TGA1tA(UGC)A MTQ1P53944 314 aa7.39□□□□□ -1.23
TGA1tA(UGC)A RSC9Q03124 581 aa7.39□□□□□ -1.23
TGA1tA(UGC)A SPC24Q04477 213 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 195.5 ms