RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W TRM112P53738 135 aaPredicted RBP3.28□□□□□ -1.88
TRM112YNR046W HER2Q03557 464 aa3.28□□□□□ -1.88
TRM112YNR046W HHF1P02309 103 aaKnown RBP3.27□□□□□ -1.89
TRM112YNR046W MAS2P11914 482 aa3.27□□□□□ -1.89
TRM112YNR046W SAG1P20840 650 aa3.27□□□□□ -1.89
TRM112YNR046W PRM5P40476 318 aa3.27□□□□□ -1.89
TRM112YNR046W LYS12P40495 371 aaKnown RBP3.27□□□□□ -1.89
TRM112YNR046W MDE1P47095 244 aa3.27□□□□□ -1.89
TRM112YNR046W RET3P53600 189 aa3.27□□□□□ -1.89
TRM112YNR046W MTQ1P53944 314 aa3.27□□□□□ -1.89
TRM112YNR046W RTT103Q05543 409 aa3.27□□□□□ -1.89
TRM112YNR046W LOT6Q07923 191 aa3.27□□□□□ -1.89
TRM112YNR046W RTC5Q12108 567 aaKnown RBP3.27□□□□□ -1.89
TRM112YNR046W CLN3P13365 580 aa3.26□□□□□ -1.89
TRM112YNR046W DEG1P31115 442 aaKnown RBP3.26□□□□□ -1.89
TRM112YNR046W RAD5P32849 1169 aaPredicted RBP3.26□□□□□ -1.89
TRM112YNR046W MNS1P32906 549 aa3.26□□□□□ -1.89
TRM112YNR046W PAD1P33751 242 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
TRM112YNR046W YBL059WP34224 193 aa3.26□□□□□ -1.89
TRM112YNR046W GEP4P38812 185 aa3.26□□□□□ -1.89
TRM112YNR046W MAM33P40513 266 aa3.26□□□□□ -1.89
TRM112YNR046W YIL067CP40514 678 aa3.26□□□□□ -1.89
TRM112YNR046W MEP2P41948 499 aa3.26□□□□□ -1.89
TRM112YNR046W PRM6Q04705 352 aa3.26□□□□□ -1.89
TRM112YNR046W PBA1Q05778 276 aa3.26□□□□□ -1.89
TRM112YNR046W MDM36Q06820 579 aa3.26□□□□□ -1.89
TRM112YNR046W TSR1Q07381 788 aaKnown RBP3.26□□□□□ -1.89
TRM112YNR046W YRM1Q12340 786 aa3.26□□□□□ -1.89
TRM112YNR046W YER078W-AQ3E7A2 54 aa3.26□□□□□ -1.89
TRM112YNR046W YMR230W-AQ3E7B5 62 aa3.26□□□□□ -1.89
TRM112YNR046W FSH3Q99369 266 aa3.26□□□□□ -1.89
TRM112YNR046W PIS1P06197 220 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W SSC1P0CS90 654 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W SPT15P13393 240 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W CPR3P25719 182 aa3.25□□□□□ -1.89
TRM112YNR046W PHA2P32452 334 aa3.25□□□□□ -1.89
TRM112YNR046W TOA2P32774 122 aa3.25□□□□□ -1.89
TRM112YNR046W PTK1P36002 662 aaPredicted RBP3.25□□□□□ -1.89
TRM112YNR046W PTH1P38876 190 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W SPG5P42933 373 aa3.25□□□□□ -1.89
TRM112YNR046W MTM1P53320 366 aa3.25□□□□□ -1.89
TRM112YNR046W RRN9P53437 365 aa3.25□□□□□ -1.89
TRM112YNR046W CWC25P53854 179 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W NUP116Q02630 1113 aa3.25□□□□□ -1.89
TRM112YNR046W YMR102CQ03177 834 aa3.25□□□□□ -1.89
TRM112YNR046W SMC5Q08204 1093 aa3.25□□□□□ -1.89
TRM112YNR046W EAF3Q12432 401 aa3.25□□□□□ -1.89
TRM112YNR046W AHC1Q12433 566 aa3.25□□□□□ -1.89
TRM112YNR046W HTZ1Q12692 134 aaKnown RBP3.25□□□□□ -1.89
TRM112YNR046W TRP1P00912 224 aa3.24□□□□□ -1.89
TRM112YNR046W DBR1P24309 405 aaKnown RBP3.24□□□□□ -1.89
TRM112YNR046W SUR1P33300 382 aa3.24□□□□□ -1.89
TRM112YNR046W TIR2P33890 251 aa3.24□□□□□ -1.89
TRM112YNR046W SBE22P38814 852 aa3.24□□□□□ -1.89
TRM112YNR046W NDT80P38830 627 aa3.24□□□□□ -1.89
TRM112YNR046W YHR131CP38835 850 aa3.24□□□□□ -1.89
TRM112YNR046W LCP5P40079 357 aaPredicted RBP3.24□□□□□ -1.89
TRM112YNR046W TOS2P50078 622 aa3.24□□□□□ -1.89
TRM112YNR046W MRM2P53123 320 aa3.24□□□□□ -1.89
TRM112YNR046W YNL146WP53906 100 aa3.24□□□□□ -1.89
TRM112YNR046W ARR1Q06596 294 aa3.24□□□□□ -1.89
TRM112YNR046W YOR387CQ08910 206 aa3.24□□□□□ -1.89
TRM112YNR046W MEX67Q99257 599 aaKnown RBP3.24□□□□□ -1.89
TRM112YNR046W YOR338WQ99326 363 aa3.24□□□□□ -1.89
TRM112YNR046W SUP35P05453 685 aaKnown RBP3.23□□□□□ -1.89
TRM112YNR046W CYC3P06182 269 aa3.23□□□□□ -1.89
TRM112YNR046W PHO2P07269 559 aa3.23□□□□□ -1.89
TRM112YNR046W RNR2P09938 399 aaKnown RBP3.23□□□□□ -1.89
TRM112YNR046W GRR1P24814 1151 aa3.23□□□□□ -1.89
TRM112YNR046W ARO2P28777 376 aaKnown RBP3.23□□□□□ -1.89
TRM112YNR046W GPX2P38143 162 aa3.23□□□□□ -1.89
TRM112YNR046W YHR218WP38899 603 aa3.23□□□□□ -1.89
TRM112YNR046W YDR089WP38966 869 aa3.23□□□□□ -1.89
TRM112YNR046W KRE9P39005 276 aa3.23□□□□□ -1.89
TRM112YNR046W PES4P39684 611 aa3.23□□□□□ -1.89
TRM112YNR046W OSW5P40219 148 aa3.23□□□□□ -1.89
TRM112YNR046W SEC9P40357 651 aa3.23□□□□□ -1.89
TRM112YNR046W AIM24P47127 394 aa3.23□□□□□ -1.89
TRM112YNR046W YGL114WP53134 725 aa3.23□□□□□ -1.89
TRM112YNR046W ELP3Q02908 557 aaKnown RBP3.23□□□□□ -1.89
TRM112YNR046W AIM33Q04516 312 aa3.23□□□□□ -1.89
TRM112YNR046W YPR078CQ06813 372 aa3.23□□□□□ -1.89
TRM112YNR046W SHS1Q07657 551 aa3.23□□□□□ -1.89
TRM112YNR046W YOL075CQ08234 1294 aa3.23□□□□□ -1.89
TRM112YNR046W ERV2Q12284 196 aa3.23□□□□□ -1.89
TRM112YNR046W MDY2Q12285 212 aa3.23□□□□□ -1.89
TRM112YNR046W YOR012WQ12351 137 aa3.23□□□□□ -1.89
TRM112YNR046W NAM2P11325 894 aa3.22□□□□□ -1.89
TRM112YNR046W HXT2P23585 541 aa3.22□□□□□ -1.89
TRM112YNR046W DAL2P25335 343 aa3.22□□□□□ -1.89
TRM112YNR046W YUR1P26725 428 aa3.22□□□□□ -1.89
TRM112YNR046W POP5P28005 173 aa3.22□□□□□ -1.89
TRM112YNR046W KAR9P32526 644 aa3.22□□□□□ -1.89
TRM112YNR046W RRF1P38771 230 aa3.22□□□□□ -1.89
TRM112YNR046W YHK8P38776 514 aa3.22□□□□□ -1.89
TRM112YNR046W YHR122WP38829 231 aa3.22□□□□□ -1.89
TRM112YNR046W LIN1P38852 340 aaPredicted RBP3.22□□□□□ -1.89
TRM112YNR046W ALP1P38971 573 aa3.22□□□□□ -1.89
TRM112YNR046W HAC1P41546 238 aa3.22□□□□□ -1.89
TRM112YNR046W YHC3P47040 408 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms