RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W SAG1P20840 650 aa3.08□□□□□ -1.92
UBP8YMR223W PPH22P23595 377 aa3.08□□□□□ -1.92
UBP8YMR223W YCL068CP25593 260 aa3.08□□□□□ -1.92
UBP8YMR223W IMG1P25626 169 aa3.08□□□□□ -1.92
UBP8YMR223W PTK1P36002 662 aaPredicted RBP3.08□□□□□ -1.92
UBP8YMR223W YKR015CP36111 568 aa3.08□□□□□ -1.92
UBP8YMR223W SWD3P38123 315 aa3.08□□□□□ -1.92
UBP8YMR223W YHR182WP38870 785 aa3.08□□□□□ -1.92
UBP8YMR223W YER085CP40058 173 aa3.08□□□□□ -1.92
UBP8YMR223W HXT14P42833 540 aa3.08□□□□□ -1.92
UBP8YMR223W YFL067WP43537 175 aa3.08□□□□□ -1.92
UBP8YMR223W RMD9P53140 646 aaKnown RBP3.08□□□□□ -1.92
UBP8YMR223W TWF1P53250 332 aa3.08□□□□□ -1.92
UBP8YMR223W RTT102P53330 157 aa3.08□□□□□ -1.92
UBP8YMR223W RET3P53600 189 aa3.08□□□□□ -1.92
UBP8YMR223W PET117Q02771 107 aa3.08□□□□□ -1.92
UBP8YMR223W ACL4Q03771 387 aa3.08□□□□□ -1.92
UBP8YMR223W VAC14Q06708 880 aa3.08□□□□□ -1.92
UBP8YMR223W LOT6Q07923 191 aa3.08□□□□□ -1.92
UBP8YMR223W SIL1Q08199 421 aa3.08□□□□□ -1.92
UBP8YMR223W YLR278CQ05854 1341 aa3.07□□□□□ -1.92
UBP8YMR223W CDC37P06101 506 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W ILV5P06168 395 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W UGA1P17649 471 aa3.07□□□□□ -1.92
UBP8YMR223W MEK1P24719 497 aaPredicted RBP3.07□□□□□ -1.92
UBP8YMR223W BEM1P29366 551 aa3.07□□□□□ -1.92
UBP8YMR223W SDH3P33421 198 aa3.07□□□□□ -1.92
UBP8YMR223W WBP1P33767 430 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W TCD2P36101 447 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W MAK5P38112 773 aaPredicted RBP3.07□□□□□ -1.92
UBP8YMR223W FAD1P38913 306 aa3.07□□□□□ -1.92
UBP8YMR223W YIL067CP40514 678 aa3.07□□□□□ -1.92
UBP8YMR223W ABM1P47146 123 aa3.07□□□□□ -1.92
UBP8YMR223W YIP5P53108 310 aa3.07□□□□□ -1.92
UBP8YMR223W MPS2P53159 387 aa3.07□□□□□ -1.92
UBP8YMR223W DRN1P53255 507 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W RPT4P53549 437 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W BRX1Q08235 291 aaKnown RBP3.07□□□□□ -1.92
UBP8YMR223W RLM1Q12224 676 aa3.07□□□□□ -1.92
UBP8YMR223W NBL1Q3E7Y6 73 aa3.07□□□□□ -1.92
UBP8YMR223W SSA3P09435 649 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W CLN3P13365 580 aa3.06□□□□□ -1.92
UBP8YMR223W KGD1P20967 1014 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W OSM1P21375 501 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W IDH2P28241 369 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W SSE2P32590 693 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W SEC66P33754 206 aa3.06□□□□□ -1.92
UBP8YMR223W TAE1P38340 232 aa3.06□□□□□ -1.92
UBP8YMR223W SMF2P38778 549 aa3.06□□□□□ -1.92
UBP8YMR223W PRM9P39551 298 aa3.06□□□□□ -1.92
UBP8YMR223W OTU1P43558 301 aa3.06□□□□□ -1.92
UBP8YMR223W RPA34P47006 233 aaPredicted RBP3.06□□□□□ -1.92
UBP8YMR223W EMC2P47133 292 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W GTO1P48239 356 aa3.06□□□□□ -1.92
UBP8YMR223W IMD4P50094 524 aaKnown RBP3.06□□□□□ -1.92
UBP8YMR223W RMR1P53060 241 aa3.06□□□□□ -1.92
UBP8YMR223W YGR067CP53243 804 aa3.06□□□□□ -1.92
UBP8YMR223W GPI1P53306 609 aa3.06□□□□□ -1.92
UBP8YMR223W PRM1P53835 661 aa3.06□□□□□ -1.92
UBP8YMR223W SPO19Q03029 223 aa3.06□□□□□ -1.92
UBP8YMR223W FIN1Q03898 291 aa3.06□□□□□ -1.92
UBP8YMR223W PDS5Q04264 1277 aa3.06□□□□□ -1.92
UBP8YMR223W YMR027WQ04371 470 aa3.06□□□□□ -1.92
UBP8YMR223W GTO3Q04806 366 aa3.06□□□□□ -1.92
UBP8YMR223W FUS2Q05670 677 aa3.06□□□□□ -1.92
UBP8YMR223W YFH1Q07540 174 aa3.06□□□□□ -1.92
UBP8YMR223W SMC5Q08204 1093 aa3.06□□□□□ -1.92
UBP8YMR223W YLL067CQ07888 1374 aa3.05□□□□□ -1.92
UBP8YMR223W RAD52P06778 471 aaKnown RBP3.05□□□□□ -1.92
UBP8YMR223W MRP13P12686 339 aa3.05□□□□□ -1.92
UBP8YMR223W RDS1P25611 832 aa3.05□□□□□ -1.92
UBP8YMR223W NDI1P32340 513 aa3.05□□□□□ -1.92
UBP8YMR223W MEI5P32489 222 aa3.05□□□□□ -1.92
UBP8YMR223W YBR144CP34215 104 aa3.05□□□□□ -1.92
UBP8YMR223W HCS1P34243 683 aa3.05□□□□□ -1.92
UBP8YMR223W GDT1P38301 280 aaPredicted RBP3.05□□□□□ -1.92
UBP8YMR223W TOM22P49334 152 aa3.05□□□□□ -1.92
UBP8YMR223W RIB4P50861 169 aaPredicted RBP3.05□□□□□ -1.92
UBP8YMR223W DBP6P53734 629 aaKnown RBP3.05□□□□□ -1.92
UBP8YMR223W ERV41Q04651 352 aa3.05□□□□□ -1.92
UBP8YMR223W VTA1Q06263 330 aa3.05□□□□□ -1.92
UBP8YMR223W SRN2Q99176 213 aa3.05□□□□□ -1.92
UBP8YMR223W GAL3P13045 520 aa3.04□□□□□ -1.92
UBP8YMR223W SPO7P18410 259 aa3.04□□□□□ -1.92
UBP8YMR223W YPK2P18961 677 aa3.04□□□□□ -1.92
UBP8YMR223W URA4P20051 364 aa3.04□□□□□ -1.92
UBP8YMR223W RVS161P25343 265 aaKnown RBP3.04□□□□□ -1.92
UBP8YMR223W PET18P25362 215 aa3.04□□□□□ -1.92
UBP8YMR223W IMP3P32899 183 aaPredicted RBP3.04□□□□□ -1.92
UBP8YMR223W SWC5P38326 303 aa3.04□□□□□ -1.92
UBP8YMR223W END3P39013 349 aa3.04□□□□□ -1.92
UBP8YMR223W AIM22P47051 409 aa3.04□□□□□ -1.92
UBP8YMR223W URB2P47108 1174 aa3.04□□□□□ -1.92
UBP8YMR223W YGR149WP48236 432 aa3.04□□□□□ -1.92
UBP8YMR223W SHY1P53266 389 aa3.04□□□□□ -1.92
UBP8YMR223W IPI3P53877 555 aa3.04□□□□□ -1.92
UBP8YMR223W PIR3Q03180 325 aa3.04□□□□□ -1.92
UBP8YMR223W URH1Q04179 340 aa3.04□□□□□ -1.92
UBP8YMR223W YDL057WQ07379 328 aa3.04□□□□□ -1.92
UBP8YMR223W MED4Q12343 284 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms