RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SUB1P54000 292 aaKnown RBP3.08□□□□□ -1.92
SEC28YIL076W KTR6P54070 446 aa3.08□□□□□ -1.92
SEC28YIL076W PRP42Q03776 544 aaKnown RBP3.08□□□□□ -1.92
SEC28YIL076W ERB1Q04660 807 aaKnown RBP3.08□□□□□ -1.92
SEC28YIL076W MCH1Q07376 486 aa3.08□□□□□ -1.92
SEC28YIL076W COX13P32799 129 aa3.07□□□□□ -1.92
SEC28YIL076W SKN1P33336 771 aa3.07□□□□□ -1.92
SEC28YIL076W OLA1P38219 394 aaKnown RBP3.07□□□□□ -1.92
SEC28YIL076W STN1P38960 494 aa3.07□□□□□ -1.92
SEC28YIL076W SER3P40054 469 aa3.07□□□□□ -1.92
SEC28YIL076W CDC21P06785 304 aa3.06□□□□□ -1.92
SEC28YIL076W ALG1P16661 449 aa3.06□□□□□ -1.92
SEC28YIL076W SWE1P32944 819 aa3.06□□□□□ -1.92
SEC28YIL076W YGR117CP53270 476 aa3.06□□□□□ -1.92
SEC28YIL076W SPR6Q01684 191 aa3.06□□□□□ -1.92
SEC28YIL076W FCY22Q12119 530 aa3.06□□□□□ -1.92
SEC28YIL076W RUP1Q12242 671 aa3.06□□□□□ -1.92
SEC28YIL076W HTZ1Q12692 134 aaKnown RBP3.06□□□□□ -1.92
SEC28YIL076W TY1B-DR4Q07793 1604 aa3.05□□□□□ -1.92
SEC28YIL076W PAB1P04147 577 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92 RIP-Chip
SEC28YIL076W ATP22P50273 684 aaPredicted RBP3.05□□□□□ -1.92
SEC28YIL076W YDR131CQ03899 556 aa3.05□□□□□ -1.92
SEC28YIL076W YDL114WQ07530 308 aa3.05□□□□□ -1.92
SEC28YIL076W CLB1P24868 471 aa3.04□□□□□ -1.92
SEC28YIL076W FUN26P31381 517 aa3.04□□□□□ -1.92
SEC28YIL076W DEP1P31385 405 aa3.04□□□□□ -1.92
SEC28YIL076W RAD5P32849 1169 aaPredicted RBP3.04□□□□□ -1.92
SEC28YIL076W ZTA1P38230 334 aaKnown RBP3.04□□□□□ -1.92
SEC28YIL076W BMT2P38278 337 aa3.04□□□□□ -1.92
SEC28YIL076W INM1P38710 295 aa3.04□□□□□ -1.92
SEC28YIL076W SEC9P40357 651 aa3.04□□□□□ -1.92
SEC28YIL076W TCB2P48231 1178 aa3.04□□□□□ -1.92
SEC28YIL076W YDL199CQ12407 687 aa3.04□□□□□ -1.92
SEC28YIL076W PRM7Q12459 698 aa3.04□□□□□ -1.92
SEC28YIL076W RAX2Q12465 1220 aa3.04□□□□□ -1.92
SEC28YIL076W KOG1P38873 1557 aa3.04□□□□□ -1.92
SEC28YIL076W SKT5P34226 696 aa3.03□□□□□ -1.92
SEC28YIL076W JNM1P36224 373 aa3.03□□□□□ -1.92
SEC28YIL076W GPI16P38875 610 aa3.03□□□□□ -1.92
SEC28YIL076W TOS2P50078 622 aa3.03□□□□□ -1.92
SEC28YIL076W PIN3Q06449 215 aa3.03□□□□□ -1.92
SEC28YIL076W AEP3Q12089 606 aa3.03□□□□□ -1.92
SEC28YIL076W TCB3Q03640 1545 aaKnown RBP3.03□□□□□ -1.92
SEC28YIL076W CMK2P22517 447 aa3.02□□□□□ -1.93
SEC28YIL076W HSP104P31539 908 aaKnown RBP3.02□□□□□ -1.93
SEC28YIL076W RIM1P32445 135 aaKnown RBP3.02□□□□□ -1.93
SEC28YIL076W ZUO1P32527 433 aaKnown RBP3.02□□□□□ -1.93
SEC28YIL076W ECT1P33412 323 aa3.02□□□□□ -1.93
SEC28YIL076W DTR1P38125 572 aa3.02□□□□□ -1.93
SEC28YIL076W GPX2P38143 162 aa3.02□□□□□ -1.93
SEC28YIL076W ECM8P38246 354 aa3.02□□□□□ -1.93
SEC28YIL076W NAB3P38996 802 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SEC28YIL076W YER184CP39961 794 aa3.02□□□□□ -1.93
SEC28YIL076W YFL012WP43580 148 aa3.02□□□□□ -1.93
SEC28YIL076W HST1P53685 503 aa3.02□□□□□ -1.93
SEC28YIL076W YLR345WQ06137 509 aa3.02□□□□□ -1.93
SEC28YIL076W YPS3Q12303 508 aa3.02□□□□□ -1.93
SEC28YIL076W BI3Q9ZZW7 517 aa3.02□□□□□ -1.93
SEC28YIL076W RPC53P25441 422 aa3.01□□□□□ -1.93
SEC28YIL076W FAD1P38913 306 aa3.01□□□□□ -1.93
SEC28YIL076W STE24P47154 453 aa3.01□□□□□ -1.93
SEC28YIL076W PIB2P53191 635 aa3.01□□□□□ -1.93
SEC28YIL076W TRM112P53738 135 aaPredicted RBP3.01□□□□□ -1.93
SEC28YIL076W YPL107WQ02873 248 aa3.01□□□□□ -1.93
SEC28YIL076W YHC1Q05900 231 aaKnown RBP3.01□□□□□ -1.93
SEC28YIL076W PDX1P16451 410 aa3□□□□□ -1.93
SEC28YIL076W PFF1P38244 976 aa3□□□□□ -1.93
SEC28YIL076W PFS2P42841 465 aaKnown RBP3□□□□□ -1.93
SEC28YIL076W ZIM17P42844 174 aa3□□□□□ -1.93
SEC28YIL076W AIP1P46680 615 aaKnown RBP3□□□□□ -1.93
SEC28YIL076W ENT5Q03769 411 aaKnown RBP3□□□□□ -1.93
SEC28YIL076W YDR341CQ05506 607 aaKnown RBP3□□□□□ -1.93
SEC28YIL076W YLR456WQ06199 204 aa3□□□□□ -1.93
SEC28YIL076W RNH203Q12338 110 aa3□□□□□ -1.93
SEC28YIL076W PCL9Q12477 304 aa3□□□□□ -1.93
SEC28YIL076W OPI3P05375 206 aa2.99□□□□□ -1.93
SEC28YIL076W PUT4P15380 627 aa2.99□□□□□ -1.93
SEC28YIL076W CPR2P23285 205 aa2.99□□□□□ -1.93
SEC28YIL076W MCR1P36060 302 aaKnown RBP2.99□□□□□ -1.93
SEC28YIL076W CHL4P38907 458 aa2.99□□□□□ -1.93
SEC28YIL076W ATM1P40416 690 aa2.99□□□□□ -1.93
SEC28YIL076W VHT1P53241 593 aa2.99□□□□□ -1.93
SEC28YIL076W RMT2Q03305 412 aa2.99□□□□□ -1.93
SEC28YIL076W RFM1Q12192 310 aa2.99□□□□□ -1.93
SEC28YIL076W YOP1Q12402 180 aa2.99□□□□□ -1.93
SEC28YIL076W TPK3P05986 398 aa2.98□□□□□ -1.93
SEC28YIL076W STE7P06784 515 aa2.98□□□□□ -1.93
SEC28YIL076W SLM5P25345 492 aaKnown RBP2.98□□□□□ -1.93
SEC28YIL076W SPO23P33757 523 aa2.98□□□□□ -1.93
SEC28YIL076W RRN9P53437 365 aa2.98□□□□□ -1.93
SEC28YIL076W RPL21AQ02753 160 aaKnown RBP2.98□□□□□ -1.93
SEC28YIL076W MCT1Q12283 360 aa2.98□□□□□ -1.93
SEC28YIL076W RPL21BQ12672 160 aaKnown RBP2.98□□□□□ -1.93
SEC28YIL076W GIT1P25346 518 aa2.97□□□□□ -1.93
SEC28YIL076W TIR2P33890 251 aa2.97□□□□□ -1.93
SEC28YIL076W SOL2P37262 315 aa2.97□□□□□ -1.93
SEC28YIL076W WSC4P38739 605 aa2.97□□□□□ -1.93
SEC28YIL076W GEP4P38812 185 aa2.97□□□□□ -1.93
SEC28YIL076W PMT5P52867 743 aa2.97□□□□□ -1.93
SEC28YIL076W REX2P54964 269 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 90.5 ms