RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeast

Gene LOC1, Length 615 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOC1	YFR001W	DFG10	P40526	253 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	EGT2	P42835	1041 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	TOS2	P50078	622 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	ROG1	P53118	685 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	ECM7	Q06200	448 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	NDL1	Q06568	189 aa		2.7	□□□□□ -1.98
LOC1	YFR001W	OPI3	P05375	206 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	RPL1A	P0CX43	217 aa	Known RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	RPL1B	P0CX44	217 aa	Known RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	RPL12A	P0CX53	165 aa	Known RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	RPL12B	P0CX54	165 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	SKT5	P34226	696 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	SPT10	P35208	640 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	ATM1	P40416	690 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	ATG18	P43601	500 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	PMT5	P52867	743 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	RRP46	P53256	223 aa	Predicted RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	CLD1	P53264	445 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	ALF1	P53904	254 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	PRP3	Q03338	469 aa	Predicted RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	PRM6	Q04705	352 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	RPN5	Q12250	445 aa	Known RBP	2.69	□□□□□ -1.98
LOC1	YFR001W	YCR024C-B	Q3E7Z8	88 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	NAG1	Q8TGN9	163 aa		2.69	□□□□□ -1.98
LOC1	YFR001W	SLM5	P25345	492 aa	Known RBP	2.68	□□□□□ -1.98
LOC1	YFR001W	YSC83	P32792	385 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	MRP21	P38175	177 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	EFM4	P40516	257 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	LCB2	P40970	561 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	RSC1	P53236	928 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	RRN9	P53437	365 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	VPS9	P54787	451 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	YET2	Q04210	160 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	URC2	Q04411	772 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	LIP2	Q06005	328 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	MFG1	Q07684	458 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	YOP1	Q12402	180 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	ERP4	Q12450	207 aa		2.68	□□□□□ -1.98
LOC1	YFR001W	ARF1	P11076	181 aa	Known RBP	2.67	□□□□□ -1.98
LOC1	YFR001W	RAD5	P32849	1169 aa	Predicted RBP	2.67	□□□□□ -1.98
LOC1	YFR001W	MCR1	P36060	302 aa	Known RBP	2.67	□□□□□ -1.98
LOC1	YFR001W	GPX2	P38143	162 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	OM14	P38325	134 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	LRP1	P38801	184 aa	Known RBP	2.67	□□□□□ -1.98
LOC1	YFR001W	PAC11	P40960	533 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	MEH1	Q02205	184 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	YDR541C	Q03049	344 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	YPR091C	Q06833	770 aa		2.67	□□□□□ -1.98
LOC1	YFR001W	TPK3	P05986	398 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	MNE1	P24720	663 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	TOA2	P32774	122 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	TIR2	P33890	251 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	DOA1	P36037	715 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	YNL208W	P40159	199 aa	Known RBP	2.66	□□□□□ -1.98
LOC1	YFR001W	FCY22	Q12119	530 aa		2.66	□□□□□ -1.98
LOC1	YFR001W	CDC50	P25656	391 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	PFF1	P38244	976 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	GEP4	P38812	185 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	YER186C	P40101	306 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	YJL055W	P47044	245 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	RTT102	P53330	157 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	TRM112	P53738	135 aa	Predicted RBP	2.65	□□□□□ -1.99
LOC1	YFR001W	ASA1	Q06822	443 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	YDL114W	Q07530	308 aa		2.65	□□□□□ -1.99
LOC1	YFR001W	NOP6	Q07623	225 aa	Known RBP	2.65	□□□□□ -1.99
LOC1	YFR001W	PAR32	Q12515	295 aa	Known RBP	2.65	□□□□□ -1.99
LOC1	YFR001W	HTZ1	Q12692	134 aa	Known RBP	2.65	□□□□□ -1.99
LOC1	YFR001W	IES6	P32617	166 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	MID2	P36027	376 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	MLH1	P38920	769 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	ABM1	P47146	123 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	SKI8	Q02793	397 aa	Predicted RBP	2.64	□□□□□ -1.99
LOC1	YFR001W	SXM1	Q04175	944 aa	Known RBP	2.64	□□□□□ -1.99
LOC1	YFR001W	IPK1	Q06667	281 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	LDS2	Q08218	356 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	YDL199C	Q12407	687 aa		2.64	□□□□□ -1.99
LOC1	YFR001W	COX4	P04037	155 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	RNA1	P11745	407 aa	Known RBP	2.63	□□□□□ -1.99
LOC1	YFR001W	FUN26	P31381	517 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	ECM8	P38246	354 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	MNL1	P38888	796 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	TIM17	P39515	158 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	GDI1	P39958	451 aa	Known RBP	2.63	□□□□□ -1.99
LOC1	YFR001W	ASN2	P49090	572 aa	Known RBP	2.63	□□□□□ -1.99
LOC1	YFR001W	YIP5	P53108	310 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	MRPS16	Q02608	121 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	AAD15	Q08361	143 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	DNL4	Q08387	944 aa	Predicted RBP	2.63	□□□□□ -1.99
LOC1	YFR001W	YDL012C	Q12489	107 aa		2.63	□□□□□ -1.99
LOC1	YFR001W	PRB1	P09232	635 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	ZRC1	P20107	442 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	RRP7	P25368	297 aa	Predicted RBP	2.62	□□□□□ -1.99
LOC1	YFR001W	MDL1	P33310	695 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	PEX5	P35056	612 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	KAP104	P38217	918 aa	Known RBP	2.62	□□□□□ -1.99
LOC1	YFR001W	YHR177W	P38867	453 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	ALD5	P40047	520 aa	Known RBP	2.62	□□□□□ -1.99
LOC1	YFR001W	PCL9	Q12477	304 aa		2.62	□□□□□ -1.99
LOC1	YFR001W	MEX67	Q99257	599 aa	Known RBP	2.62	□□□□□ -1.99
LOC1	YFR001W	PSK1	P31374	1356 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms