RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C FMP33P46998 180 aa1.18□□□□□ -2.22
SEC3YER008C YGR127WP53275 312 aa1.18□□□□□ -2.22
SEC3YER008C CDC14Q00684 551 aa1.18□□□□□ -2.22
SEC3YER008C MYO5Q04439 1219 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C RNH203Q12338 110 aa1.18□□□□□ -2.22
SEC3YER008C YRM1Q12340 786 aa1.18□□□□□ -2.22
SEC3YER008C AHC1Q12433 566 aa1.18□□□□□ -2.22
SEC3YER008C CSR2Q12734 1121 aa1.18□□□□□ -2.22
SEC3YER008C TCP1P12612 559 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C BAR1P12630 587 aa1.18□□□□□ -2.22
SEC3YER008C YJU2P28320 278 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C DUG2P38149 878 aa1.18□□□□□ -2.22
SEC3YER008C SBE22P38814 852 aa1.18□□□□□ -2.22
SEC3YER008C SHQ1P40486 507 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C BNA6P43619 295 aa1.18□□□□□ -2.22
SEC3YER008C YGL114WP53134 725 aa1.18□□□□□ -2.22
SEC3YER008C ASA1Q06822 443 aa1.18□□□□□ -2.22
SEC3YER008C RGT2Q12300 763 aa1.18□□□□□ -2.22
SEC3YER008C ADF1Q2V2Q1 113 aa1.18□□□□□ -2.22
SEC3YER008C RIP1P08067 215 aa1.17□□□□□ -2.22
SEC3YER008C CNA1P23287 553 aa1.17□□□□□ -2.22
SEC3YER008C GPI12P23797 304 aa1.17□□□□□ -2.22
SEC3YER008C FUN19P28003 413 aaPredicted RBP1.17□□□□□ -2.22
SEC3YER008C PRO3P32263 286 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C HXT1P32465 570 aa1.17□□□□□ -2.22
SEC3YER008C NRP1P32770 719 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SEC3YER008C COY1P34237 679 aa1.17□□□□□ -2.22
SEC3YER008C PIM1P36775 1133 aa1.17□□□□□ -2.22
SEC3YER008C RTT107P38850 1070 aa1.17□□□□□ -2.22
SEC3YER008C SMC2P38989 1170 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C YER079WP40052 210 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C RTR1P40084 226 aaPredicted RBP1.17□□□□□ -2.22
SEC3YER008C PCP1P53259 346 aa1.17□□□□□ -2.22
SEC3YER008C COP1P53622 1201 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C YMR102CQ03177 834 aa1.17□□□□□ -2.22
SEC3YER008C BAG7Q12128 409 aa1.17□□□□□ -2.22
SEC3YER008C TAD3Q9URQ3 322 aa1.17□□□□□ -2.22
SEC3YER008C RPO41P13433 1351 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C QCR6P00127 147 aa1.17□□□□□ -2.22
SEC3YER008C CDC37P06101 506 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C RPS14AP06367 137 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C UTR1P21373 530 aa1.17□□□□□ -2.22
SEC3YER008C RPI1P23250 407 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C SIN4P32259 974 aa1.17□□□□□ -2.22
SEC3YER008C SUA5P32579 426 aa1.17□□□□□ -2.22
SEC3YER008C PDR3P33200 976 aa1.17□□□□□ -2.22
SEC3YER008C YPK3P38070 525 aa1.17□□□□□ -2.22
SEC3YER008C DIA4P38705 446 aaPredicted RBP1.17□□□□□ -2.22
SEC3YER008C SMF2P38778 549 aa1.17□□□□□ -2.22
SEC3YER008C RPS14BP39516 138 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C PRP39P39682 629 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C TRS85P46944 698 aa1.17□□□□□ -2.22
SEC3YER008C PHO86P46956 311 aa1.17□□□□□ -2.22
SEC3YER008C RPA34P47006 233 aaPredicted RBP1.17□□□□□ -2.22
SEC3YER008C PYK2P52489 506 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C SCW4P53334 386 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C MPS1P54199 764 aa1.17□□□□□ -2.22
SEC3YER008C RSC9Q03124 581 aa1.17□□□□□ -2.22
SEC3YER008C YMR034CQ05131 434 aaPredicted RBP1.17□□□□□ -2.22
SEC3YER008C BUR2Q05949 395 aa1.17□□□□□ -2.22
SEC3YER008C ARR2Q06597 130 aa1.17□□□□□ -2.22
SEC3YER008C YPR078CQ06813 372 aa1.17□□□□□ -2.22
SEC3YER008C ETT1Q08421 412 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C YLR422WQ06409 1932 aa1.17□□□□□ -2.22
SEC3YER008C RDS1P25611 832 aa1.17□□□□□ -2.22
SEC3YER008C FLO10P36170 1169 aa1.17□□□□□ -2.22
SEC3YER008C MNT4P53745 580 aa1.17□□□□□ -2.22
SEC3YER008C PET117Q02771 107 aa1.17□□□□□ -2.22
SEC3YER008C TAF12Q03761 539 aa1.17□□□□□ -2.22
SEC3YER008C ARP10Q04549 284 aa1.17□□□□□ -2.22
SEC3YER008C DIC1Q06143 298 aa1.17□□□□□ -2.22
SEC3YER008C CMS1Q07897 291 aaKnown RBP1.17□□□□□ -2.22
SEC3YER008C PEX27Q08580 376 aa1.17□□□□□ -2.22
SEC3YER008C RUP1Q12242 671 aa1.17□□□□□ -2.22
SEC3YER008C RMD5Q12508 421 aa1.17□□□□□ -2.22
SEC3YER008C ADE4P04046 510 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C GDH1P07262 454 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C CKI1P20485 582 aa1.16□□□□□ -2.22
SEC3YER008C ITR1P30605 584 aa1.16□□□□□ -2.22
SEC3YER008C SMY1P32364 656 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C ECT1P33412 323 aa1.16□□□□□ -2.22
SEC3YER008C BNA4P38169 460 aa1.16□□□□□ -2.22
SEC3YER008C RRN10P38204 145 aa1.16□□□□□ -2.22
SEC3YER008C YNG2P38806 282 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C TOM71P38825 639 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C BFR1P38934 470 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SEC3YER008C MTQ1P53944 314 aa1.16□□□□□ -2.22
SEC3YER008C ASI1P54074 624 aa1.16□□□□□ -2.22
SEC3YER008C GIP3Q03016 1276 aa1.16□□□□□ -2.22
SEC3YER008C SPO19Q03029 223 aa1.16□□□□□ -2.22
SEC3YER008C SWF1Q04629 336 aa1.16□□□□□ -2.22
SEC3YER008C ATG38Q05789 226 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C IPK1Q06667 281 aa1.16□□□□□ -2.22
SEC3YER008C SSK1Q07084 712 aa1.16□□□□□ -2.22
SEC3YER008C YFH1Q07540 174 aa1.16□□□□□ -2.22
SEC3YER008C SET6Q12529 373 aa1.16□□□□□ -2.22
SEC3YER008C RHO1P06780 209 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C RSR1P13856 272 aa1.16□□□□□ -2.22
SEC3YER008C MBR1P23493 339 aa1.16□□□□□ -2.22
SEC3YER008C GID7P25569 745 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms