RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	LCB3	P47013	409 aa		3.08	□□□□□ -1.92
RPN9	YDR427W	BIR1	P47134	954 aa		3.08	□□□□□ -1.92
RPN9	YDR427W	PMT5	P52867	743 aa		3.08	□□□□□ -1.92
RPN9	YDR427W	RRN9	P53437	365 aa		3.08	□□□□□ -1.92
RPN9	YDR427W	RPN5	Q12250	445 aa	Known RBP	3.08	□□□□□ -1.92
RPN9	YDR427W	EAF3	Q12432	401 aa		3.08	□□□□□ -1.92
RPN9	YDR427W	AAT2	P23542	418 aa	Known RBP	3.07	□□□□□ -1.92
RPN9	YDR427W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
RPN9	YDR427W	SKT5	P34226	696 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	HAC1	P41546	238 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	ATG18	P43601	500 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	CLD1	P53264	445 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	CRH1	P53301	507 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	SPR6	Q01684	191 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	URC2	Q04411	772 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	PRM6	Q04705	352 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	ECM7	Q06200	448 aa		3.07	□□□□□ -1.92
RPN9	YDR427W	NOP6	Q07623	225 aa	Known RBP	3.07	□□□□□ -1.92
RPN9	YDR427W	PIS1	P06197	220 aa	Known RBP	3.06	□□□□□ -1.92
RPN9	YDR427W	PHO91	P27514	894 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	YSC83	P32792	385 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	SPT10	P35208	640 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	MCR1	P36060	302 aa	Known RBP	3.06	□□□□□ -1.92
RPN9	YDR427W	MRP21	P38175	177 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	OXA1	P39952	402 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	DFG10	P40526	253 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	EGT2	P42835	1041 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	GYL1	Q04322	720 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	MFG1	Q07684	458 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	YCR024C-B	Q3E7Z8	88 aa		3.06	□□□□□ -1.92
RPN9	YDR427W	OPI3	P05375	206 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	COX13	P32799	129 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	PEX5	P35056	612 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	GPX2	P38143	162 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	OM14	P38325	134 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	MLH1	P38920	769 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	PAC11	P40960	533 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	ROG1	P53118	685 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	MEH1	Q02205	184 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	YDR541C	Q03049	344 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	YET2	Q04210	160 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	YDL114W	Q07530	308 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	YOP1	Q12402	180 aa		3.05	□□□□□ -1.92
RPN9	YDR427W	PDE2	P06776	526 aa		3.04	□□□□□ -1.92
RPN9	YDR427W	ARF1	P11076	181 aa	Known RBP	3.04	□□□□□ -1.92
RPN9	YDR427W	RAD5	P32849	1169 aa	Predicted RBP	3.04	□□□□□ -1.92
RPN9	YDR427W	ATM1	P40416	690 aa		3.04	□□□□□ -1.92
RPN9	YDR427W	EFM4	P40516	257 aa		3.04	□□□□□ -1.92
RPN9	YDR427W	RRP46	P53256	223 aa	Predicted RBP	3.04	□□□□□ -1.92
RPN9	YDR427W	NAG1	Q8TGN9	163 aa		3.04	□□□□□ -1.92
RPN9	YDR427W	SLM5	P25345	492 aa	Known RBP	3.03	□□□□□ -1.92
RPN9	YDR427W	FUN26	P31381	517 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	TIR2	P33890	251 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	ALD5	P40047	520 aa	Known RBP	3.03	□□□□□ -1.92
RPN9	YDR427W	YER186C	P40101	306 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	LCB2	P40970	561 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	ABM1	P47146	123 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	RTT102	P53330	157 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	YPR091C	Q06833	770 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	FCY22	Q12119	530 aa		3.03	□□□□□ -1.92
RPN9	YDR427W	TPK3	P05986	398 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	MNE1	P24720	663 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	CDC50	P25656	391 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	DOA1	P36037	715 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	ALF1	P53904	254 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	SKI8	Q02793	397 aa	Predicted RBP	3.02	□□□□□ -1.93
RPN9	YDR427W	IPK1	Q06667	281 aa		3.02	□□□□□ -1.93
RPN9	YDR427W	PAR32	Q12515	295 aa	Known RBP	3.02	□□□□□ -1.93
RPN9	YDR427W	RNA1	P11745	407 aa	Known RBP	3.01	□□□□□ -1.93
RPN9	YDR427W	MDL1	P33310	695 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	PFF1	P38244	976 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	KEG1	P43614	200 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	YJL055W	P47044	245 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	ASN2	P49090	572 aa	Known RBP	3.01	□□□□□ -1.93
RPN9	YDR427W	SXM1	Q04175	944 aa	Known RBP	3.01	□□□□□ -1.93
RPN9	YDR427W	ASA1	Q06822	443 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	DNL4	Q08387	944 aa	Predicted RBP	3.01	□□□□□ -1.93
RPN9	YDR427W	YDL199C	Q12407	687 aa		3.01	□□□□□ -1.93
RPN9	YDR427W	COX4	P04037	155 aa		3	□□□□□ -1.93
RPN9	YDR427W	MID2	P36027	376 aa		3	□□□□□ -1.93
RPN9	YDR427W	GEP4	P38812	185 aa		3	□□□□□ -1.93
RPN9	YDR427W	GDI1	P39958	451 aa	Known RBP	3	□□□□□ -1.93
RPN9	YDR427W	YNL208W	P40159	199 aa	Known RBP	3	□□□□□ -1.93
RPN9	YDR427W	PGU1	P47180	361 aa		3	□□□□□ -1.93
RPN9	YDR427W	LIP2	Q06005	328 aa		3	□□□□□ -1.93
RPN9	YDR427W	LDS2	Q08218	356 aa		3	□□□□□ -1.93
RPN9	YDR427W	AAD15	Q08361	143 aa		3	□□□□□ -1.93
RPN9	YDR427W	YDL012C	Q12489	107 aa		3	□□□□□ -1.93
RPN9	YDR427W	PRB1	P09232	635 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	RRP7	P25368	297 aa	Predicted RBP	2.99	□□□□□ -1.93
RPN9	YDR427W	SPO23	P33757	523 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	JEM1	P40358	645 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	TRM112	P53738	135 aa	Predicted RBP	2.99	□□□□□ -1.93
RPN9	YDR427W	MRPS16	Q02608	121 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	MCT1	Q12283	360 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	HTZ1	Q12692	134 aa	Known RBP	2.99	□□□□□ -1.93
RPN9	YDR427W	SRN2	Q99176	213 aa		2.99	□□□□□ -1.93
RPN9	YDR427W	MEX67	Q99257	599 aa	Known RBP	2.99	□□□□□ -1.93
RPN9	YDR427W	HSP82	P02829	709 aa	Known RBP	2.98	□□□□□ -1.93
RPN9	YDR427W	ZRC1	P20107	442 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms