RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W VHC1P38329 1120 aa1.58□□□□□ -2.16
TRM3YDL112W PKP1P40530 394 aa1.58□□□□□ -2.16
TRM3YDL112W MAD2P40958 196 aa1.58□□□□□ -2.16
TRM3YDL112W PFA5Q03289 374 aa1.58□□□□□ -2.16
TRM3YDL112W RPN9Q04062 393 aaKnown RBP1.58□□□□□ -2.16
TRM3YDL112W YDR056CQ12025 205 aa1.58□□□□□ -2.16
TRM3YDL112W APL4Q12028 832 aa1.58□□□□□ -2.16
TRM3YDL112W PRS5Q12265 496 aaKnown RBP1.58□□□□□ -2.16
TRM3YDL112W LDB17Q12342 491 aa1.58□□□□□ -2.16
TRM3YDL112W PST1Q12355 444 aa1.58□□□□□ -2.16
TRM3YDL112W RAD1P06777 1100 aa1.57□□□□□ -2.16
TRM3YDL112W ATP11P32453 318 aa1.57□□□□□ -2.16
TRM3YDL112W MEI5P32489 222 aa1.57□□□□□ -2.16
TRM3YDL112W CDC5P32562 705 aa1.57□□□□□ -2.16
TRM3YDL112W UBC6P33296 250 aaPredicted RBP1.57□□□□□ -2.16
TRM3YDL112W YMR262WP38430 313 aa1.57□□□□□ -2.16
TRM3YDL112W MDV1P47025 714 aa1.57□□□□□ -2.16
TRM3YDL112W SEH1P53011 349 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W MRPL13Q02204 264 aa1.57□□□□□ -2.16
TRM3YDL112W CRT10Q08226 957 aa1.57□□□□□ -2.16
TRM3YDL112W ULA1Q12059 462 aa1.57□□□□□ -2.16
TRM3YDL112W TPO4Q12256 659 aa1.57□□□□□ -2.16
TRM3YDL112W VPS33P20795 691 aa1.57□□□□□ -2.16
TRM3YDL112W ERG1P32476 496 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W RPS27AP35997 82 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W RPS27BP38711 82 aa1.57□□□□□ -2.16
TRM3YDL112W VPS52P39904 641 aa1.57□□□□□ -2.16
TRM3YDL112W YJR030CP47101 745 aa1.57□□□□□ -2.16
TRM3YDL112W IBA57P47158 497 aa1.57□□□□□ -2.16
TRM3YDL112W TAF11Q04226 346 aa1.57□□□□□ -2.16
TRM3YDL112W YLR177WQ06251 628 aa1.57□□□□□ -2.16
TRM3YDL112W YLR413WQ06689 675 aa1.57□□□□□ -2.16
TRM3YDL112W MGR1P25573 417 aa1.57□□□□□ -2.16
TRM3YDL112W ECM1P39715 212 aa1.57□□□□□ -2.16
TRM3YDL112W PUG1P40100 303 aa1.57□□□□□ -2.16
TRM3YDL112W SEC27P41811 889 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W PRM10P42946 383 aa1.57□□□□□ -2.16
TRM3YDL112W HOS2P53096 452 aaPredicted RBP1.57□□□□□ -2.16
TRM3YDL112W CLD1P53264 445 aa1.57□□□□□ -2.16
TRM3YDL112W CWC22P53333 577 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W KTR5P53966 522 aaPredicted RBP1.57□□□□□ -2.16
TRM3YDL112W SMX3P54999 86 aaPredicted RBP1.57□□□□□ -2.16
TRM3YDL112W UTP6Q02354 440 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W IRC15Q02733 499 aa1.57□□□□□ -2.16
TRM3YDL112W YMR027WQ04371 470 aa1.57□□□□□ -2.16
TRM3YDL112W SMA2Q04658 369 aa1.57□□□□□ -2.16
TRM3YDL112W VAM6Q07468 1049 aa1.57□□□□□ -2.16
TRM3YDL112W YOR365CQ08844 703 aa1.57□□□□□ -2.16
TRM3YDL112W GRE1Q08969 168 aa1.57□□□□□ -2.16
TRM3YDL112W YCL012CQ8J0M4 134 aa1.57□□□□□ -2.16
TRM3YDL112W FLO9P39712 1322 aa1.57□□□□□ -2.16
TRM3YDL112W RPB4P20433 221 aaPredicted RBP1.57□□□□□ -2.16
TRM3YDL112W DPB3P27344 201 aa1.57□□□□□ -2.16
TRM3YDL112W NAM9P27929 486 aa1.57□□□□□ -2.16
TRM3YDL112W YME1P32795 747 aa1.57□□□□□ -2.16
TRM3YDL112W EMP70P32802 667 aa1.57□□□□□ -2.16
TRM3YDL112W SUI1P32911 108 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W CAB3P36076 571 aa1.57□□□□□ -2.16
TRM3YDL112W SSP120P39931 234 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W PFK26P40433 827 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W APQ12P40532 138 aa1.57□□□□□ -2.16
TRM3YDL112W DUG3P53871 357 aa1.57□□□□□ -2.16
TRM3YDL112W LSM3P57743 89 aaKnown RBP1.57□□□□□ -2.16
TRM3YDL112W SHR3Q02774 210 aa1.57□□□□□ -2.16
TRM3YDL112W YPR172WQ06608 200 aa1.57□□□□□ -2.16
TRM3YDL112W YLR049CQ12110 428 aa1.57□□□□□ -2.16
TRM3YDL112W GET4Q12125 312 aa1.57□□□□□ -2.16
TRM3YDL112W YOR019WQ99248 730 aa1.57□□□□□ -2.16
TRM3YDL112W Q0010Q9ZZX9 128 aa1.57□□□□□ -2.16
TRM3YDL112W LEU4P06208 619 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W STE7P06784 515 aa1.56□□□□□ -2.16
TRM3YDL112W SPO16P17122 198 aa1.56□□□□□ -2.16
TRM3YDL112W CBF5P33322 483 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
TRM3YDL112W LOT5P34234 306 aa1.56□□□□□ -2.16
TRM3YDL112W HES1P35843 434 aa1.56□□□□□ -2.16
TRM3YDL112W YBR138CP38277 524 aa1.56□□□□□ -2.16
TRM3YDL112W BUR6P40096 142 aa1.56□□□□□ -2.16
TRM3YDL112W PMT4P46971 762 aa1.56□□□□□ -2.16
TRM3YDL112W MNN5P46982 586 aa1.56□□□□□ -2.16
TRM3YDL112W YDL183CP48569 320 aa1.56□□□□□ -2.16
TRM3YDL112W TPO3Q06451 622 aa1.56□□□□□ -2.16
TRM3YDL112W NOP6Q07623 225 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W ATG34Q12292 412 aa1.56□□□□□ -2.16
TRM3YDL112W YPR096CO13587 100 aa1.56□□□□□ -2.16
TRM3YDL112W HEM2P05373 342 aa1.56□□□□□ -2.16
TRM3YDL112W PET111P08468 800 aa1.56□□□□□ -2.16
TRM3YDL112W AQY1P0CD91 305 aa1.56□□□□□ -2.16
TRM3YDL112W ERG8P24521 451 aa1.56□□□□□ -2.16
TRM3YDL112W RPC37P36121 282 aa1.56□□□□□ -2.16
TRM3YDL112W CCT4P39078 528 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W YIL001WP40560 513 aa1.56□□□□□ -2.16
TRM3YDL112W GCD10P41814 478 aa1.56□□□□□ -2.16
TRM3YDL112W YFL015CP43578 164 aa1.56□□□□□ -2.16
TRM3YDL112W ALB1P47019 175 aaPredicted RBP1.56□□□□□ -2.16
TRM3YDL112W IBD2P53892 351 aa1.56□□□□□ -2.16
TRM3YDL112W RPM2Q02773 1202 aa1.56□□□□□ -2.16
TRM3YDL112W PLM2Q04383 521 aa1.56□□□□□ -2.16
TRM3YDL112W YMR114CQ04471 368 aaKnown RBP1.56□□□□□ -2.16
TRM3YDL112W YOR376WQ08900 122 aa1.56□□□□□ -2.16
TRM3YDL112W MEC1P38111 2368 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms