RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W FDH1Q08911 376 aa6.28□□□□□ -1.4
SWD1YAR003W ALG6Q12001 544 aaKnown RBP6.28□□□□□ -1.4
SWD1YAR003W TY1A-GR1Q12085 440 aa6.28□□□□□ -1.4
SWD1YAR003W SFM1Q12314 213 aa6.28□□□□□ -1.4
SWD1YAR003W SEC39Q12745 709 aa6.28□□□□□ -1.4
SWD1YAR003W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.28□□□□□ -1.4
SWD1YAR003W TY1A-OLQ92392 440 aaKnown RBP6.28□□□□□ -1.4
SWD1YAR003W PUT2P07275 575 aa6.27□□□□□ -1.41
SWD1YAR003W ZWF1P11412 505 aaKnown RBP6.27□□□□□ -1.41
SWD1YAR003W MER1P16523 270 aa6.27□□□□□ -1.41
SWD1YAR003W GRR1P24814 1151 aa6.27□□□□□ -1.41
SWD1YAR003W NRP1P32770 719 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
SWD1YAR003W YHR177WP38867 453 aa6.27□□□□□ -1.41
SWD1YAR003W RSP5P39940 809 aaKnown RBP6.27□□□□□ -1.41
SWD1YAR003W ELP2P42935 788 aa6.27□□□□□ -1.41
SWD1YAR003W TIM54P47045 478 aa6.27□□□□□ -1.41
SWD1YAR003W TRM9P49957 279 aa6.27□□□□□ -1.41
SWD1YAR003W RMR1P53060 241 aa6.27□□□□□ -1.41
SWD1YAR003W YGR012WP53206 393 aa6.27□□□□□ -1.41
SWD1YAR003W NOG1Q02892 647 aaKnown RBP6.27□□□□□ -1.41
SWD1YAR003W KRE28Q04431 385 aa6.27□□□□□ -1.41
SWD1YAR003W ENT2Q05785 613 aa6.27□□□□□ -1.41
SWD1YAR003W SPO77Q06134 477 aa6.27□□□□□ -1.41
SWD1YAR003W ARR1Q06596 294 aa6.27□□□□□ -1.41
SWD1YAR003W RSA1Q08932 381 aa6.27□□□□□ -1.41
SWD1YAR003W NSI1Q12457 570 aa6.27□□□□□ -1.41
SWD1YAR003W YOL159C-AQ3E769 90 aa6.27□□□□□ -1.41
SWD1YAR003W MF(ALPHA)1P01149 165 aa6.26□□□□□ -1.41
SWD1YAR003W SNF4P12904 322 aa6.26□□□□□ -1.41
SWD1YAR003W PRP2P20095 876 aaPredicted RBP6.26□□□□□ -1.41
SWD1YAR003W RPS1BP23248 255 aaKnown RBP6.26□□□□□ -1.41
SWD1YAR003W YCL049CP25577 312 aa6.26□□□□□ -1.41
SWD1YAR003W YMC1P32331 307 aa6.26□□□□□ -1.41
SWD1YAR003W MSN2P33748 704 aa6.26□□□□□ -1.41
SWD1YAR003W VPS51P36116 164 aa6.26□□□□□ -1.41
SWD1YAR003W SLM4P38247 162 aa6.26□□□□□ -1.41
SWD1YAR003W FAU1P40099 211 aa6.26□□□□□ -1.41
SWD1YAR003W SNL1P40548 159 aa6.26□□□□□ -1.41
SWD1YAR003W CFD1P40558 293 aa6.26□□□□□ -1.41
SWD1YAR003W GPI8P49018 411 aa6.26□□□□□ -1.41
SWD1YAR003W ATP22P50273 684 aaPredicted RBP6.26□□□□□ -1.41
SWD1YAR003W YNL181WP53878 407 aa6.26□□□□□ -1.41
SWD1YAR003W ASI2P53895 289 aa6.26□□□□□ -1.41
SWD1YAR003W RHO4Q00246 291 aa6.26□□□□□ -1.41
SWD1YAR003W RRN5Q02983 363 aa6.26□□□□□ -1.41
SWD1YAR003W DAL4Q04895 635 aa6.26□□□□□ -1.41
SWD1YAR003W AVO1Q08236 1176 aa6.26□□□□□ -1.41
SWD1YAR003W YDR061WQ12298 539 aa6.26□□□□□ -1.41
SWD1YAR003W WTM1Q12363 437 aaKnown RBP6.26□□□□□ -1.41
SWD1YAR003W WHI5Q12416 295 aa6.26□□□□□ -1.41
SWD1YAR003W SKS1Q12505 502 aa6.26□□□□□ -1.41
SWD1YAR003W TIM9O74700 87 aa6.25□□□□□ -1.41
SWD1YAR003W SUI3P09064 285 aaKnown RBP6.25□□□□□ -1.41
SWD1YAR003W YAP1P19880 650 aaKnown RBP6.25□□□□□ -1.41
SWD1YAR003W RPB5P20434 215 aa6.25□□□□□ -1.41
SWD1YAR003W RER1P25560 188 aa6.25□□□□□ -1.41
SWD1YAR003W APE2P32454 952 aaKnown RBP6.25□□□□□ -1.41
SWD1YAR003W GDH2P33327 1092 aaKnown RBP6.25□□□□□ -1.41
SWD1YAR003W PET112P33893 541 aa6.25□□□□□ -1.41
SWD1YAR003W BET3P36149 193 aa6.25□□□□□ -1.41
SWD1YAR003W RIB1P38066 345 aa6.25□□□□□ -1.41
SWD1YAR003W BIG1P38813 335 aa6.25□□□□□ -1.41
SWD1YAR003W MTG2P38860 518 aa6.25□□□□□ -1.41
SWD1YAR003W VHR1P40522 640 aa6.25□□□□□ -1.41
SWD1YAR003W YGR201CP42936 225 aa6.25□□□□□ -1.41
SWD1YAR003W STE24P47154 453 aa6.25□□□□□ -1.41
SWD1YAR003W UBC9P50623 157 aaPredicted RBP6.25□□□□□ -1.41
SWD1YAR003W YGR045CP53229 120 aa6.25□□□□□ -1.41
SWD1YAR003W NRM1P53718 249 aa6.25□□□□□ -1.41
SWD1YAR003W RSC9Q03124 581 aa6.25□□□□□ -1.41
SWD1YAR003W RIM13Q03792 727 aa6.25□□□□□ -1.41
SWD1YAR003W RSF1Q05043 376 aa6.25□□□□□ -1.41
SWD1YAR003W PUS7Q08647 676 aaKnown RBP6.25□□□□□ -1.41
SWD1YAR003W YOR019WQ99248 730 aa6.25□□□□□ -1.41
SWD1YAR003W ATR1P13090 542 aa6.24□□□□□ -1.41
SWD1YAR003W MKK1P32490 508 aa6.24□□□□□ -1.41
SWD1YAR003W SSE2P32590 693 aaKnown RBP6.24□□□□□ -1.41
SWD1YAR003W SWD1P39706 426 aa6.24□□□□□ -1.41
SWD1YAR003W YEL020CP39994 560 aa6.24□□□□□ -1.41
SWD1YAR003W GVP36P40531 326 aaKnown RBP6.24□□□□□ -1.41
SWD1YAR003W AGP3P43548 558 aa6.24□□□□□ -1.41
SWD1YAR003W ALR2P43553 858 aa6.24□□□□□ -1.41
SWD1YAR003W FAR7P43592 221 aa6.24□□□□□ -1.41
SWD1YAR003W AAD10P47182 288 aa6.24□□□□□ -1.41
SWD1YAR003W ASK10P48361 1146 aa6.24□□□□□ -1.41
SWD1YAR003W MRK1P50873 501 aa6.24□□□□□ -1.41
SWD1YAR003W TWF1P53250 332 aa6.24□□□□□ -1.41
SWD1YAR003W ELA1P53861 379 aaPredicted RBP6.24□□□□□ -1.41
SWD1YAR003W YDR239CQ03780 787 aa6.24□□□□□ -1.41
SWD1YAR003W YMR310CQ04867 317 aaPredicted RBP6.24□□□□□ -1.41
SWD1YAR003W MEU1Q07938 337 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SWD1YAR003W GLE1Q12315 538 aa6.24□□□□□ -1.41
SWD1YAR003W FMP27Q06179 2628 aa6.24□□□□□ -1.41
SWD1YAR003W TOR2P32600 2474 aaKnown RBP6.23□□□□□ -1.41
SWD1YAR003W FAR1P21268 830 aa6.23□□□□□ -1.41
SWD1YAR003W DAL82P21705 255 aa6.23□□□□□ -1.41
SWD1YAR003W CHA1P25379 360 aaKnown RBP6.23□□□□□ -1.41
SWD1YAR003W UBC8P28263 218 aa6.23□□□□□ -1.41
SWD1YAR003W NNK1P36003 928 aa6.23□□□□□ -1.41
SWD1YAR003W IFA38P38286 347 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms