RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 ASIC2Q16515 512 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 CCNI2Q6ZMN8 369 aaPredicted RBP14.38□□□□□ -0.11
BRF1-222ENST00000635152 MIGA2Q7L4E1 593 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 CDAN1Q8IWY9 1227 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 SELENOOQ9BVL4 669 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 NUCKS1Q9H1E3 243 aaKnown RBP14.38□□□□□ -0.11
BRF1-222ENST00000635152 SLC18A3Q16572 532 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 FLAD1Q8NFF5 587 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 GANQ9H2C0 597 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 ENTPD3O75355 529 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 NMT1P30419 496 aaKnown RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 PAFAH1B1P43034 410 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 FKBP1AP62942 108 aaKnown RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 PTK2Q05397 1052 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 EXOC3L4Q17RC7 722 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 ZC2HC1CQ53FD0 456 aaPredicted RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 DYDC2Q96IM9 177 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 ACBD3Q9H3P7 528 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 VEZTQ9HBM0 779 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 HPCAL4Q9UM19 191 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 TRAF3IP3Q9Y228 551 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 NR3C1P04150 777 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 UCHL3P15374 230 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 CIITAP33076 1130 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 LRCH2Q5VUJ6 765 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 RINT1Q6NUQ1 792 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 MYCT1Q8N699 235 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 GOLPH3Q9H4A6 298 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 RBM12Q9NTZ6 932 aaKnown RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 TMOD2Q9NZR1 351 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
BRF1-222ENST00000635152 SLX4Q8IY92 1834 aa14.37□□□□□ -0.11
BRF1-222ENST00000635152 IGLV3-22A0A075B6J6 115 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 RNF40O75150 1001 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 ASTN1O14525 1302 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 PDXKO00764 312 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 PRLRP16471 622 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 CAPN2P17655 700 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 PON1P27169 355 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 MMP14P50281 582 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 BTNL9Q6UXG8 535 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 FAM71BQ8TC56 605 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 CNKSR1Q969H4 720 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 ARHGEF10LQ9HCE6 1279 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 LUC7LQ9NQ29 371 aaKnown RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 PKD2L1Q9P0L9 805 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 SLITRK3O94933 977 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 FAM13AO94988 1023 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 EYA4O95677 639 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 SYF2O95926 243 aaKnown RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 GGCXP38435 758 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 MCTP2Q6DN12 878 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 SND1Q7KZF4 910 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRF1-222ENST00000635152 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 RNF10Q8N5U6 811 aaKnown RBP14.36□□□□□ -0.11
BRF1-222ENST00000635152 AIPL1Q9NZN9 384 aa14.36□□□□□ -0.11
BRF1-222ENST00000635152 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 GCOM1H8Y6P7 765 aaPredicted RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 DDX39AO00148 427 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 POLR2MP0CAP2 368 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 EPB41P11171 864 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 COG2Q14746 738 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 NAB2Q15742 525 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 HSD17B14Q9BPX1 270 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 TYW1Q9NV66 732 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 GAS7O60861 476 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 C8orf74Q6P047 294 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 TRMT1LQ7Z2T5 733 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 IRF2BP2Q7Z5L9 587 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 C7orf43Q8WVR3 580 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 POLR3CQ9BUI4 534 aaPredicted RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 MED4Q9NPJ6 270 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 GCNT4Q9P109 453 aa14.35□□□□□ -0.11
BRF1-222ENST00000635152 AJAP1Q9UKB5 411 aaPredicted RBP14.35□□□□□ -0.11
BRF1-222ENST00000635152 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
BRF1-222ENST00000635152 SLC26A4O43511 780 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms