RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ZNF689Q96CS4 500 aaPredicted RBP8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 TBC1D17Q9HA65 648 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 MCM9Q9NXL9 1143 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 CA14Q9ULX7 337 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 DUSP12Q9UNI6 340 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 KIAA1671Q9BY89 1806 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 SPTLC1O15269 473 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 KPNA6O60684 536 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 TOP3BO95985 862 aaKnown RBP8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 NDUFB10O96000 172 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 RFX1P22670 979 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 ZAP70P43403 619 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 SNAP25P60880 206 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 PPP2R5BQ15173 497 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 BRDTQ58F21 947 aaPredicted RBP8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 C7orf31Q8N865 590 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 WHAMMQ8TF30 809 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 AFG1LQ8WV93 481 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 SECISBP2LQ93073 1101 aaKnown RBP8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 EPC1Q9H2F5 836 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 CYP39A1Q9NYL5 469 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 PLXNA4Q9HCM2 1894 aa8.25□□□□□ -1.09
SCAMP1-206ENST00000618166 RAD50Q92878 1312 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 HOXD8P13378 290 aaPredicted RBP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 PDE4BQ07343 736 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 APOBRQ0VD83 1088 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 TDGQ13569 410 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 PAN2Q504Q3 1202 aaKnown RBP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 RNFT1Q5M7Z0 435 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 C19orf48Q6RUI8 117 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 C12orf76Q8N812 135 aaPredicted RBP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 SDR42E1Q8WUS8 393 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 MAP4K1Q92918 833 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 TRERF1Q96PN7 1200 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 RIOK1Q9BRS2 568 aaKnown RBP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 FOXQ1Q9C009 403 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 FAM217BQ9NTX9 383 aaPredicted RBP8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 AKAP2Q9Y2D5 859 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
SCAMP1-206ENST00000618166 F5H6K3 240 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ADAM23O75077 832 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 IDH1O75874 414 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 DGKIO75912 1065 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ZNF286BP0CG31 522 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ALAS1P13196 640 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 GRM5P41594 1212 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 GATMP50440 423 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ALDH5A1P51649 535 aaPredicted RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 CSTF1Q05048 431 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 KLRC3Q07444 240 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 PLPP4Q5VZY2 271 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 LARP1BQ659C4 914 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 TSSK4Q6SA08 328 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 NSMFQ6X4W1 530 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 LRRC47Q8N1G4 583 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 RSAD2Q8WXG1 361 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ZCCHC14Q8WYQ9 949 aaKnown RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 CHMP4CQ96CF2 233 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 ADAM7Q9H2U9 754 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 KCNK12Q9HB15 430 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 SIT1Q9Y3P8 196 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 HECTD1Q9ULT8 2610 aa8.23□□□□□ -1.09
SCAMP1-206ENST00000618166 HIDE1A8MVS5 230 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 UQCRFS1P1P0C7P4 283 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 OAZ1P54368 228 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 PTSQ03393 145 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 ARID5BQ14865 1188 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 KIAA0753Q2KHM9 967 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 PRR23CQ6ZRP0 262 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 CHST3Q7LGC8 479 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 SERINC5Q86VE9 423 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 ZBTB44Q8NCP5 570 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 ATRIPQ8WXE1 791 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 GATA6Q92908 595 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 CDCA3Q99618 268 aaPredicted RBP8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 KANSL2Q9H9L4 492 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 CYP26B1Q9NR63 512 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 GMEB2Q9UKD1 530 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 WASF3Q9UPY6 502 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 PCDHGA2Q9Y5H1 932 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 FSCN2O14926 492 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 LILRB5O75023 590 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 EOMESO95936 686 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 HOXB8P17481 243 aaPredicted RBP8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 CDK8P49336 464 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 RALBP1Q15311 655 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 ZNF528Q3MIS6 628 aa8.22□□□□□ -1.09
SCAMP1-206ENST00000618166 NAALADL2Q58DX5 795 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms