RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 LINC01599Q8WXQ3 324 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 PHKBQ93100 1093 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 IL17RAQ96F46 866 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 UBE2ZQ9H832 354 aaPredicted RBP17.25■□□□□ 0.35
TGFB1-202ENST00000597453 RC3H2Q9HBD1 1191 aaKnown RBP17.25■□□□□ 0.35
TGFB1-202ENST00000597453 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
TGFB1-202ENST00000597453 H3BNC9 293 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 DHX15O43143 795 aaKnown RBP17.24■□□□□ 0.35
TGFB1-202ENST00000597453 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
TGFB1-202ENST00000597453 CYP3A4P08684 503 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 LINC00271P0C7V0 271 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 PSMA5P28066 241 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 GPM6BQ13491 265 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 ABHD15Q6UXT9 468 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
TGFB1-202ENST00000597453 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
TGFB1-202ENST00000597453 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
TGFB1-202ENST00000597453 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.23■□□□□ 0.35
TGFB1-202ENST00000597453 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 BACH1O14867 736 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 NTRK3Q16288 839 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 IER5Q5VY09 327 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 MTHFD1LQ6UB35 978 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 RTN4RL1Q86UN2 441 aaPredicted RBP17.23■□□□□ 0.35
TGFB1-202ENST00000597453 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
TGFB1-202ENST00000597453 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 FIBCD1Q8N539 461 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 C6orf50Q9HD87 102 aa17.23■□□□□ 0.35
TGFB1-202ENST00000597453 SMIM35A0A1B0GVV1 85 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 IPO5O00410 1097 aaKnown RBP17.22■□□□□ 0.35
TGFB1-202ENST00000597453 RPLP2P05387 115 aaKnown RBP17.22■□□□□ 0.35
TGFB1-202ENST00000597453 ATP4AP20648 1035 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 CTNNB1P35222 781 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 SLC26A2P50443 739 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 PTPROQ16827 1216 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
TGFB1-202ENST00000597453 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
TGFB1-202ENST00000597453 ZNF689Q96CS4 500 aaPredicted RBP17.22■□□□□ 0.35
TGFB1-202ENST00000597453 CELF4Q9BZC1 486 aaKnown RBP17.22■□□□□ 0.35
TGFB1-202ENST00000597453 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 ZBTB42B2RXF5 422 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 KCNA5P22460 613 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 KLRC1P26715 233 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
TGFB1-202ENST00000597453 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 CRIPAKQ8N1N5 446 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 CCDC12Q8WUD4 166 aaPredicted RBP17.21■□□□□ 0.35
TGFB1-202ENST00000597453 ZNF577Q9BSK1 485 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
TGFB1-202ENST00000597453 ZNF302Q9NR11 478 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
TGFB1-202ENST00000597453 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.34
TGFB1-202ENST00000597453 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 M0QZ92 97 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 HBP1O60381 514 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 DGKIO75912 1065 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 GNA11P29992 359 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 PDIA3P30101 505 aaKnown RBP17.2■□□□□ 0.34
TGFB1-202ENST00000597453 EVCP57679 992 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 KRT76Q01546 638 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 PAK2Q13177 524 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 PRR16Q569H4 304 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 TCEAL5Q5H9L2 206 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 MIS18BP1Q6P0N0 1132 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.2■□□□□ 0.34
TGFB1-202ENST00000597453 SLC26A6Q9BXS9 759 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
TGFB1-202ENST00000597453 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
TGFB1-202ENST00000597453 COL1A2P08123 1366 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 GRM6O15303 877 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 EDIL3O43854 480 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 IFNAR1P17181 557 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 BMPR1AP36894 532 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 ANAPC15P60006 121 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 SETQ01105 290 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 TOB2Q14106 344 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 BTG3Q14201 252 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 ZNF746Q6NUN9 644 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms