RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 DEFB128Q7Z7B8 93 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 BBXQ8WY36 941 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-213ENST00000590234 SNX21Q969T3 373 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 FAM167AQ96KS9 214 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 RNPC3Q96LT9 517 aaKnown RBP16.48■□□□□ 0.23
CXXC1-213ENST00000590234 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 COL1A2P08123 1366 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 FGBP02675 491 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 PRKCEQ02156 737 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 ORC2Q13416 577 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-213ENST00000590234 UGCGQ16739 394 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 ZNF484Q5JVG2 852 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 LARP1BQ659C4 914 aaKnown RBP16.47■□□□□ 0.23
CXXC1-213ENST00000590234 MCTP1Q6DN14 999 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 TRMT1LQ7Z2T5 733 aaKnown RBP16.47■□□□□ 0.23
CXXC1-213ENST00000590234 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
CXXC1-213ENST00000590234 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 ZNF862O60290 1169 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 OATP04181 439 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 NCAPH2Q6IBW4 605 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 HSCBQ8IWL3 235 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 VWCEQ96DN2 955 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 ZBTB10Q96DT7 871 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 INTS4Q96HW7 963 aaKnown RBP16.46■□□□□ 0.23
CXXC1-213ENST00000590234 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
CXXC1-213ENST00000590234 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
CXXC1-213ENST00000590234 CEP131Q9UPN4 1083 aa16.46■□□□□ 0.23
CXXC1-213ENST00000590234 EML1O00423 815 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 SLC34A2O95436 690 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 RPLP2P05387 115 aaKnown RBP16.45■□□□□ 0.22
CXXC1-213ENST00000590234 CTSHP09668 335 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 TXKP42681 527 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
CXXC1-213ENST00000590234 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 ZNF174Q15697 407 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 BANK1Q8NDB2 785 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 MTMR9Q96QG7 549 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-213ENST00000590234 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 PCDHA12Q9UN75 941 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 PCDHA2Q9Y5H9 948 aa16.45■□□□□ 0.22
CXXC1-213ENST00000590234 ZBTB42B2RXF5 422 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 SOX1O00570 391 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-213ENST00000590234 NBNO60934 754 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 CXCL10P02778 98 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 ACTN1P12814 892 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 PDCP20941 246 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 KLRC1P26715 233 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 PSMC5P62195 406 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 NBR1Q14596 966 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 MBTPS1Q14703 1052 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 GPNMBQ14956 572 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 EPHA7Q15375 998 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
CXXC1-213ENST00000590234 FAM49AQ9H0Q0 323 aaPredicted RBP16.44■□□□□ 0.22
CXXC1-213ENST00000590234 SMIM35A0A1B0GVV1 85 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 DKC1O60832 514 aaKnown RBP eCLIP16.43■□□□□ 0.22
CXXC1-213ENST00000590234 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
CXXC1-213ENST00000590234 OR52Z1P0C646 297 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 QARSP47897 775 aaKnown RBP16.43■□□□□ 0.22
CXXC1-213ENST00000590234 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-213ENST00000590234 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 XKR3Q5GH77 459 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 FAM26DQ5JW98 314 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
CXXC1-213ENST00000590234 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
CXXC1-213ENST00000590234 VPS37CA5D8V6 355 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-213ENST00000590234 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 C22orf31O95567 290 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 LRCH3Q96II8 777 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 LXNQ9BS40 222 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
CXXC1-213ENST00000590234 PCDHB6Q9Y5E3 794 aa16.42■□□□□ 0.22
CXXC1-213ENST00000590234 LAMA3Q16787 3333 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 SIP14410 1827 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 POTEMA6NI47 508 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 M0QZ92 97 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 MAGEB2O15479 319 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 BAIAP3O94812 1187 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 STBD1O95210 358 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 CHRNA1P02708 482 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
CXXC1-213ENST00000590234 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 MGAT3Q09327 533 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 IER5Q5VY09 327 aa16.41■□□□□ 0.22
CXXC1-213ENST00000590234 TET1Q8NFU7 2136 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms