RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 FAAP100Q0VG06 881 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 GRIK4Q16099 956 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 TPH2Q8IWU9 490 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 IGSF22Q8N9C0 903 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 BBXQ8WY36 941 aaPredicted RBP17.41■□□□□ 0.38
GHDC-209ENST00000588762 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 PRDM5Q9NQX1 630 aaPredicted RBP17.41■□□□□ 0.38
GHDC-209ENST00000588762 TRMT13Q9NUP7 481 aaKnown RBP17.41■□□□□ 0.38
GHDC-209ENST00000588762 TMEM39AQ9NV64 488 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
GHDC-209ENST00000588762 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 COL1A2P08123 1366 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 ATP4AP20648 1035 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 IGBP1P78318 339 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 STK38Q15208 465 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 PTPAQ15257 358 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 ZNF484Q5JVG2 852 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 HAUS3Q68CZ6 603 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 LMBR1Q8WVP7 490 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 LXNQ9BS40 222 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 LOXHD1Q8IVV2 1947 aa17.4■□□□□ 0.38
GHDC-209ENST00000588762 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 SLITRK3O94933 977 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 HOXC8P31273 242 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 DDIT3P35638 169 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
GHDC-209ENST00000588762 CTTNQ14247 550 aaKnown RBP17.39■□□□□ 0.37
GHDC-209ENST00000588762 SLC39A14Q15043 492 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 IL17AQ16552 155 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 C4orf19Q8IY42 314 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
GHDC-209ENST00000588762 TUFT1Q9NNX1 390 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 PDLIM7Q9NR12 457 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 SEPT9Q9UHD8 586 aaPredicted RBP17.39■□□□□ 0.37
GHDC-209ENST00000588762 ARID2Q68CP9 1835 aa17.39■□□□□ 0.37
GHDC-209ENST00000588762 TREHO43280 583 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 YEATS4O95619 227 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 CYP2C9P11712 490 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 RPA1P27694 616 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 LONP1P36776 959 aaKnown RBP17.38■□□□□ 0.37
GHDC-209ENST00000588762 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
GHDC-209ENST00000588762 ZNF200P98182 395 aaPredicted RBP17.38■□□□□ 0.37
GHDC-209ENST00000588762 PTK7Q13308 1070 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 KRT79Q5XKE5 535 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 SNX29Q8TEQ0 813 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 AK8Q96MA6 479 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 TUBE1Q9UJT0 475 aa17.38■□□□□ 0.37
GHDC-209ENST00000588762 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
GHDC-209ENST00000588762 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 RAG1P15918 1043 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 MARCKSP29966 332 aaPredicted RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 ADAM17P78536 824 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 DNM1Q05193 864 aaKnown RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 BFSP2Q13515 415 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 HIC1Q14526 733 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 SERINC5Q86VE9 423 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 CATSPER3Q86XQ3 398 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 LINC00301Q8NCQ3 95 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 TRAPPC12Q8WVT3 735 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 HIPK3Q9H422 1215 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
GHDC-209ENST00000588762 SRPRBQ9Y5M8 271 aaKnown RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 MORC2Q9Y6X9 1032 aaPredicted RBP17.37■□□□□ 0.37
GHDC-209ENST00000588762 CEP290O15078 2479 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 SPTLC2O15270 562 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 MED24O75448 989 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 STBD1O95210 358 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 LYPLA2O95372 231 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 SYN1P17600 705 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 MUTP22033 750 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 KLRC1P26715 233 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 UBA7P41226 1012 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 KRT85P78386 507 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 MTERF2Q49AM1 385 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 MARCH8Q5T0T0 291 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 KRI1Q8N9T8 703 aaKnown RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 CCDC43Q96MW1 224 aaKnown RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 NACC1Q96RE7 527 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 CTAGE1Q96RT6 745 aa17.36■□□□□ 0.37
GHDC-209ENST00000588762 WRAP73Q9P2S5 460 aaPredicted RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 FBXO2Q9UK22 296 aaPredicted RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 ZMYND8Q9ULU4 1186 aaPredicted RBP17.36■□□□□ 0.37
GHDC-209ENST00000588762 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms