RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ATP13A4Q4VNC1 1196 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 SYCP2LQ5T4T6 812 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ALG1Q9BT22 464 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 PHF20Q9BVI0 1012 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 SLC13A1Q9BZW2 595 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ASCC2Q9H1I8 757 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ZBTB40Q9NUA8 1239 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 TJP1Q07157 1748 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 RREB1Q92766 1687 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
CNOT1-222ENST00000570139 NUP188Q5SRE5 1749 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 ZNF891A8MT65 544 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 H3BM21 787 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 ARVCFO00192 962 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 KCNQ3O43525 872 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 SIGLEC6O43699 453 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 PRKD3O94806 890 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 SLITRK5O94991 958 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 SNUPNO95149 360 aaKnown RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 EIF2S2P20042 333 aaKnown RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 CCND1P24385 295 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 SLC39A6Q13433 755 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 DPY19L1Q2PZI1 675 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 SKOR2Q2VWA4 1001 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 KCNT2Q6UVM3 1135 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 TCF7L1Q9HCS4 588 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 GPR27Q9NS67 375 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 LUC7L2Q9Y383 392 aaKnown RBP8.55□□□□□ -1.04
CNOT1-222ENST00000570139 PCDHA8Q9Y5H6 950 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
CNOT1-222ENST00000570139 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 TERTO14746 1132 aaKnown RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 MEFVO15553 781 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 STARD3NLO95772 234 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 BCRP11274 1271 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 PURAQ00577 322 aaKnown RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 TESK1Q15569 626 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 E4F1Q66K89 784 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 ABHD17CQ6PCB6 329 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 NXPE1Q8N323 547 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 IGSF22Q8N9C0 903 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 MARCH10Q8NA82 808 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 CHST14Q8NCH0 376 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 KREMEN2Q8NCW0 462 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 PIGBQ92521 554 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 COPS5Q92905 334 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
CNOT1-222ENST00000570139 ACSS3Q9H6R3 686 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 CHST7Q9NS84 486 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 NPFFR2Q9Y5X5 522 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 BACE2Q9Y5Z0 518 aa8.54□□□□□ -1.04
CNOT1-222ENST00000570139 SBF2Q86WG5 1849 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
CNOT1-222ENST00000570139 GSNP06396 782 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 RAB6AP20340 208 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 DGKGP49619 791 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 NEXNQ0ZGT2 675 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 PAK1Q13153 545 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 KCNAB2Q13303 367 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
CNOT1-222ENST00000570139 RPAP2Q8IXW5 612 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-222ENST00000570139 DNAAF4Q8WXU2 420 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 SCYL1Q96KG9 808 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 GPR101Q96P66 508 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-222ENST00000570139 EMC7Q9NPA0 242 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 PNMA8BQ9ULN7 279 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-222ENST00000570139 TNNQ9UQP3 1299 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
CNOT1-222ENST00000570139 BTAF1O14981 1849 aa8.52□□□□□ -1.04
CNOT1-222ENST00000570139 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.04
CNOT1-222ENST00000570139 LY75O60449 1722 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 ADCY9O60503 1353 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 SHISA8B8ZZ34 492 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 H0Y8X5 98 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 STXBP3O00186 592 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 GSTA4O15217 222 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 HMMRO75330 724 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 THBDP07204 575 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 MYBL2P10244 700 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 LTBRP36941 435 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 RECQLP46063 649 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 NOP2P46087 812 aaKnown RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 USP11P51784 963 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 KPNA1P52294 538 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-222ENST00000570139 SESN3P58005 492 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 CYP4F3Q08477 520 aa8.52□□□□□ -1.05
CNOT1-222ENST00000570139 KLF1Q13351 362 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms