RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 NME8Q8N427 588 aa27.28■■□□□ 1.96
PBX1-217ENST00000559578 TRAPPC12Q8WVT3 735 aa27.28■■□□□ 1.96
PBX1-217ENST00000559578 LINC01599Q8WXQ3 324 aa27.28■■□□□ 1.96
PBX1-217ENST00000559578 CELF4Q9BZC1 486 aaKnown RBP27.28■■□□□ 1.96
PBX1-217ENST00000559578 POTEB3A0JP26 581 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 SMCO2A6NFE2 343 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 STAG3L1P0CL83 205 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 AP3B2Q13367 1082 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 POTEBQ6S5H4 581 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 DHX32Q7L7V1 743 aaKnown RBP27.27■■□□□ 1.96
PBX1-217ENST00000559578 RTN4RL1Q86UN2 441 aaPredicted RBP27.27■■□□□ 1.96
PBX1-217ENST00000559578 NPAS4Q8IUM7 802 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 BRPF3Q9ULD4 1205 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 PADI3Q9ULW8 664 aa27.27■■□□□ 1.96
PBX1-217ENST00000559578 SMIM35A0A1B0GVV1 85 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 PRR33A8MZF0 331 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 STXBP3O00186 592 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 MEIS1O00470 390 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 ATG7O95352 703 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 MMP1P03956 469 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 ZNF76P36508 570 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 LTBRP36941 435 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 EXOSC10Q01780 885 aaKnown RBP27.26■■□□□ 1.95
PBX1-217ENST00000559578 FUT2Q10981 343 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 HYAL1Q12794 435 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 ITGB3BPQ13352 177 aaPredicted RBP27.26■■□□□ 1.95
PBX1-217ENST00000559578 CTC1Q2NKJ3 1217 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 MTHFD1LQ6UB35 978 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 P2RX5Q93086 422 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 ALG13Q9NP73 1137 aaKnown RBP27.26■■□□□ 1.95
PBX1-217ENST00000559578 BARHL2Q9NY43 387 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 PLAGL2Q9UPG8 496 aa27.26■■□□□ 1.95
PBX1-217ENST00000559578 MRPL42Q9Y6G3 142 aaKnown RBP27.26■■□□□ 1.95
PBX1-217ENST00000559578 KDM3AQ9Y4C1 1321 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 SCG2P13521 617 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 SREBF1P36956 1147 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 KRT76Q01546 638 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 ZP2Q05996 745 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 NAALADL2Q58DX5 795 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 BMP2KLQ5H9B9 411 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 CRIPAKQ8N1N5 446 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 PPP2R3CQ969Q6 453 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 TCEANC2Q96MN5 208 aa27.25■■□□□ 1.95
PBX1-217ENST00000559578 GOLGA8AA7E2F4 631 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 GOLGA8BA8MQT2 603 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 BACH1O14867 736 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 CSPG5O95196 566 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 FAM160B1Q5W0V3 765 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 ADHFE1Q8IWW8 467 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 IGFLR1Q9H665 355 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 TMEM260Q9NX78 707 aa27.24■■□□□ 1.95
PBX1-217ENST00000559578 IGKV6D-21A0A0A0MT36 114 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 DDX39AO00148 427 aaKnown RBP27.23■■□□□ 1.95
PBX1-217ENST00000559578 DCXO43602 365 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 HBP1O60381 514 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 CLK2P49760 499 aaKnown RBP27.23■■□□□ 1.95
PBX1-217ENST00000559578 CSPP1Q1MSJ5 1256 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 TSGA10IPQ3SY00 556 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 FAM43BQ6ZT52 329 aaPredicted RBP27.23■■□□□ 1.95
PBX1-217ENST00000559578 NIPA1Q7RTP0 329 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 LRFN2Q9ULH4 789 aa27.23■■□□□ 1.95
PBX1-217ENST00000559578 KLF18A0A0U1RQI7 1052 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 KLRC1P26715 233 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 KRT32Q14532 448 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 SMAD2Q15796 467 aaKnown RBP27.22■■□□□ 1.95
PBX1-217ENST00000559578 CLUL1Q15846 466 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 PAN2Q504Q3 1202 aaKnown RBP27.22■■□□□ 1.95
PBX1-217ENST00000559578 ABHD15Q6UXT9 468 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 ATP8B4Q8TF62 1192 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 GINS2Q9Y248 185 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 KIAA1671Q9BY89 1806 aa27.22■■□□□ 1.95
PBX1-217ENST00000559578 C19orf67A6NJJ6 358 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 CCNE2O96020 404 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 RCAN1P53805 252 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 DLX2Q07687 328 aaPredicted RBP27.21■■□□□ 1.95
PBX1-217ENST00000559578 NFX1Q12986 1120 aaKnown RBP27.21■■□□□ 1.95
PBX1-217ENST00000559578 CAMK1Q14012 370 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 PLA2G4DQ86XP0 818 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 UPF3BQ9BZI7 483 aaKnown RBP27.21■■□□□ 1.95
PBX1-217ENST00000559578 ZNF302Q9NR11 478 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 NAP1L2Q9ULW6 460 aaPredicted RBP27.21■■□□□ 1.95
PBX1-217ENST00000559578 COL1A2P08123 1366 aa27.21■■□□□ 1.95
PBX1-217ENST00000559578 ITGB1P05556 798 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 HMGB1P09429 215 aaKnown RBP27.2■■□□□ 1.94
PBX1-217ENST00000559578 HOXD11P31277 338 aaPredicted RBP27.2■■□□□ 1.94
PBX1-217ENST00000559578 FGD1P98174 961 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 TMEM266Q2M3C6 531 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 ADCK5Q3MIX3 580 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 ODR4Q5SWX8 454 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 MIS18BP1Q6P0N0 1132 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 SKAP1Q86WV1 359 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 RASEFQ8IZ41 740 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 KLHL23Q8NBE8 558 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 SPPL3Q8TCT6 385 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 UIMC1Q96RL1 719 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 POP1Q99575 1024 aaKnown RBP27.2■■□□□ 1.94
PBX1-217ENST00000559578 TMX1Q9H3N1 280 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 RNF216Q9NWF9 866 aaPredicted RBP27.2■■□□□ 1.94
PBX1-217ENST00000559578 PCDHB7Q9Y5E2 793 aa27.2■■□□□ 1.94
PBX1-217ENST00000559578 FAM86B1E9PN63 330 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms