RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, human

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTB-208	ENST00000556626	ZBTB41	Q5SVQ8	909 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	CCNY	Q8ND76	341 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	ERBB4	Q15303	1308 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	GCFC2	P16383	781 aa	Known RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	ANGPTL8	Q6UXH0	198 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	FAM47E	Q6ZV65	393 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	SAMSN1	Q9NSI8	373 aa	Known RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	RNF103-CHMP3	A0A140T963	221 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	ANKRD65	E5RJM6	399 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	PALM	O75781	387 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	SMARCA1	P28370	1054 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	NBPF20	Q3BBV1	942 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	BBS5	Q8N3I7	341 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	CARD14	Q9BXL6	1004 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	COX16	Q9P0S2	106 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	NEURL1B	A8MQ27	555 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	KIT	P10721	976 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	TRIP13	Q15645	432 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	OSBPL9	Q96SU4	736 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	LCMT1	Q9UIC8	334 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	PCDHA4	Q9UN74	947 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	LRRIQ4	A6NIV6	560 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	DEAF1	O75398	565 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	CCDC15	Q0P6D6	951 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	DDB1	Q16531	1140 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	EYA1	Q99502	592 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	CDV3	Q9UKY7	258 aa	Known RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	DIAPH2	O60879	1101 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	ZYX	Q15942	572 aa	Known RBP	11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	PLA2G4D	Q86XP0	818 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	GIMAP4	Q9NUV9	329 aa		11.63	□□□□□ -0.55
SPTB-208	ENST00000556626	MAP4	P27816	1152 aa	Known RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	RAPGEF5	Q92565	580 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	BTBD6	Q96KE9	485 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	SLC38A10	Q9HBR0	1119 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ZNF233	A6NK53	670 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	HLA-DPA1	P20036	260 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ATP2B4	P23634	1241 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	PDE6B	P35913	854 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	RASSF3	Q86WH2	238 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	FAM161B	Q96MY7	647 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	MMP1	P03956	469 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ARL4A	P40617	200 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CTSW	P56202	376 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CHCHD3	Q9NX63	227 aa	Known RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	DONSON	Q9NYP3	566 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	PARP3	Q9Y6F1	533 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	TNR	Q92752	1358 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	PRPSAP2	O60256	369 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	POLR2M	P0CAP2	368 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ARL4C	P56559	192 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	KRT31	Q15323	416 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CCDC90B	Q9GZT6	254 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	TOM1	O60784	492 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	COPS2	P61201	443 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	PODN	Q7Z5L7	613 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	LRRC59	Q96AG4	307 aa	Known RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ZBTB18	Q99592	522 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	ADA2	Q9NZK5	511 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CAPRIN1	Q14444	709 aa	Known RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CCDC85B	Q15834	202 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	KLHL38	Q2WGJ6	581 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	MAPKAPK5	Q8IW41	473 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	S100A5	P33763	92 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	CHURC1	Q8WUH1	139 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	SSH3	Q8TE77	659 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	UBN1	Q9NPG3	1134 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	DCTN4	Q9UJW0	460 aa		11.62	□□□□□ -0.55
SPTB-208	ENST00000556626	RERE	Q9P2R6	1566 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	LPXN	O60711	386 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	CARS	P49589	748 aa	Known RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	FRA10AC1	Q70Z53	315 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	TMEM206	Q9H813	350 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	CCDC22	O60826	627 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	IFNA8	P32881	189 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	MEFV	O15553	781 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	ZBED1	O96006	694 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	LINC00301	Q8NCQ3	95 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	SEPT3	Q9UH03	358 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	CIT	O14578	2027 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	ITSN1	Q15811	1721 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	KPNA7	A9QM74	516 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	HOXC9	P31274	260 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	ATP11B	Q9Y2G3	1177 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	ABL1	P00519	1130 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	GJC2	Q5T442	439 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	NDST4	Q9H3R1	872 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	MRPL11	Q9Y3B7	192 aa	Known RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	IGBP1	P78318	339 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	TCP10	Q12799	353 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	THAP11	Q96EK4	314 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	THOC1	Q96FV9	657 aa	Known RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	SAYSD1	Q9NPB0	183 aa		11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	PER1	O15534	1290 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTB-208	ENST00000556626	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms