RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	YWHAB	P31946	246 aa	Known RBP	13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	ACLY	P53396	1101 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	KARS	Q15046	597 aa	Known RBP	13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	UGCG	Q16739	394 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	XKR3	Q5GH77	459 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	RRAGB	Q5VZM2	374 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	CXCL17	Q6UXB2	119 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	PDILT	Q8N807	584 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	IQUB	Q8NA54	791 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	ANKLE1	Q8NAG6	615 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	C16orf70	Q9BSU1	422 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	MMTAG2	Q9BU76	263 aa	Known RBP	13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	NRBP2	Q9NSY0	501 aa		13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.99	□□□□□ -0.17
ABCD4-223	ENST00000555904		A0A1B0GVL5	298 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	LYPLA2	O95372	231 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	SPATA31C1	P0DKV0	1188 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	PLCG1	P19174	1290 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	SYK	P43405	635 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	IRX5	P78411	483 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	MFSD10	Q14728	455 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	KIAA0753	Q2KHM9	967 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	HYI	Q5T013	277 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	USP49	Q70CQ1	688 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	CEP57L1	Q8IYX8	460 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	C7orf31	Q8N865	590 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	ATP8B4	Q8TF62	1192 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	BBX	Q8WY36	941 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	PCYT2	Q99447	389 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	PLIN2	Q99541	437 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	CRISPLD2	Q9H0B8	497 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	CUEDC2	Q9H467	287 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	STK17A	Q9UEE5	414 aa		13.98	□□□□□ -0.17
ABCD4-223	ENST00000555904	POLR2D	O15514	142 aa	Known RBP	13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	HBP1	O60381	514 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	XRCC6	P12956	609 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	MCM4	P33991	863 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	PSEN2	P49810	448 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	NDUFA8	P51970	172 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	FAM160A1	Q05DH4	1040 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	GRB10	Q13322	594 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	TMEM119	Q4V9L6	283 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	PIGO	Q8TEQ8	1089 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	DHX58	Q96C10	678 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	PANK2	Q9BZ23	570 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	MAGEF1	Q9HAY2	307 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	STARD7	Q9NQZ5	370 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	ANKEF1	Q9NU02	776 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	USP25	Q9UHP3	1055 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	PHF24	Q9UPV7	400 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904	DOCK5	Q9H7D0	1870 aa		13.97	□□□□□ -0.17
ABCD4-223	ENST00000555904		A0A1W2PQ45	241 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904		A0A1W2PQY0	241 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	ARHGEF35	A5YM69	484 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	ZNF862	O60290	1169 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	KIN	O60870	393 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	GADD45B	O75293	160 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	MBD3	O95983	291 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	SSB	P05455	408 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	GNAT1	P11488	350 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	PPFIA1	Q13136	1202 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	PLCB4	Q15147	1175 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	XKR9	Q5GH70	373 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	FAM47C	Q5HY64	1035 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	EXOC8	Q8IYI6	725 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	LARP4B	Q92615	738 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	CEP170P1	Q96L14	293 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	BHMT2	Q9H2M3	363 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	LMBRD1	Q9NUN5	540 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	HOOK1	Q9UJC3	728 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	DBR1	Q9UK59	544 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	HPSE	Q9Y251	543 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	PPME1	Q9Y570	386 aa		13.96	□□□□□ -0.17
ABCD4-223	ENST00000555904	CENPF	P49454	3210 aa		13.96	□□□□□ -0.18
ABCD4-223	ENST00000555904	COL1A2	P08123	1366 aa		13.96	□□□□□ -0.18
ABCD4-223	ENST00000555904	NRCAM	Q92823	1304 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	FRMPD3	Q5JV73	1810 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904		A0A0U1RQG5	324 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	FAM237A	A0A1B0GTK4	181 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	RRN3P2	A6NIE6	340 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	EYA4	O95677	639 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	SMIM10L2A	P0DMW4	78 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	SMIM10L2B	P0DMW5	78 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	POLG	P54098	1239 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	AMPD3	Q01432	767 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	TBC1D8B	Q0IIM8	1120 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	ITGA7	Q13683	1181 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	ECM1	Q16610	540 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	MTERF2	Q49AM1	385 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	ZNF484	Q5JVG2	852 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	PLA2G4F	Q68DD2	849 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	ANO5	Q75V66	913 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	SLC7A3	Q8WY07	619 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	RAD54L	Q92698	747 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	KAT2B	Q92831	832 aa		13.95	□□□□□ -0.18
ABCD4-223	ENST00000555904	PNMA5	Q96PV4	448 aa		13.95	□□□□□ -0.18

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