RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SMIM35A0A1B0GVV1 85 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 FAM86B1E9PN63 330 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 C5orf67F2Z3F1 127 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 H3BNC9 293 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 M0QZ92 97 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 ENPP3O14638 875 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 DHX15O43143 795 aaKnown RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 HBP1O60381 514 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 FAM86B2P0C5J1 330 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 GHRP10912 638 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 PSMA5P28066 241 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 GNA11P29992 359 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 CIITAP33076 1130 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 ADD1P35611 737 aaKnown RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF76P36508 570 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TFF2Q03403 129 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 APOBRQ0VD83 1088 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 PKN1Q16512 942 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 PTPROQ16827 1216 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 FAM160B1Q5W0V3 765 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 FAM117BQ6P1L5 589 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 ABHD15Q6UXT9 468 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TMEM192Q8IY95 271 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 FAM177A1Q8N128 213 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 BICD2Q8TD16 824 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 DNAJB3Q8WWF6 145 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 BRF1Q92994 677 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 IL17RAQ96F46 866 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 C17orf80Q9BSJ5 609 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 RNF26Q9BY78 433 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-203ENST00000554074 C6orf50Q9HD87 102 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TBC1D22BQ9NU19 505 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TMEM260Q9NX78 707 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TRPC6Q9Y210 931 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 TRPV2Q9Y5S1 764 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 CDY2AQ9Y6F7 541 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 ADGRA3Q8IWK6 1321 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 IGSF9BQ9UPX0 1349 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 POTEB3A0JP26 581 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 IPO5O00410 1097 aaKnown RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 EIF5BO60841 1220 aaKnown RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 UPP2O95045 317 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 CCNE2O96020 404 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 LINC00271P0C7V0 271 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 CPA1P15085 419 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 IFNAR1P17181 557 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 KCNQ1P51787 676 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 KRT76Q01546 638 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 AKAP17AQ02040 695 aaKnown RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 GPM6BQ13491 265 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 COL19A1Q14993 1142 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 NTRK3Q16288 839 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 LEXMQ3ZCV2 418 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF484Q5JVG2 852 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ODR4Q5SWX8 454 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 JAKMIP3Q5VZ66 844 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 MIS18BP1Q6P0N0 1132 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 POTEBQ6S5H4 581 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 MTHFD1LQ6UB35 978 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 PLA2G4DQ86XP0 818 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 SMAP1Q8IYB5 467 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 CRIPAKQ8N1N5 446 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 FIBCD1Q8N539 461 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ATP8B4Q8TF62 1192 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF689Q96CS4 500 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 PGBD1Q96JS3 809 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 LMAN2LQ9H0V9 348 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 AGO3Q9H9G7 860 aaKnown RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 SH3GLB2Q9NR46 395 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 MTUS1Q9ULD2 1270 aa7.51□□□□□ -1.21
SLIRP-203ENST00000554074 NAP1L2Q9ULW6 460 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-203ENST00000554074 ARID2Q68CP9 1835 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 BACH1O14867 736 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 NCK2O43639 380 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 DGKIO75912 1065 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 STAG3L1P0CL83 205 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 KLRC1P26715 233 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 PDIA3P30101 505 aaKnown RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 BMPR1AP36894 532 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 USP11P51784 963 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 IGBP1P78318 339 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 PUS10Q3MIT2 529 aaKnown RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 PDXDC2PQ6P474 469 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 RUFY3Q7L099 469 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 NPAS4Q8IUM7 802 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 CCDC60Q8IWA6 550 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 CMTR2Q8IYT2 770 aaKnown RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF710Q8N1W2 664 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 BANK1Q8NDB2 785 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 LINC01599Q8WXQ3 324 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 BBXQ8WY36 941 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms