RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 COG1Q8WTW3 980 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 CRACR2AQ9BSW2 395 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 ZCCHC17Q9NP64 241 aaKnown RBP19.47■□□□□ 0.71
SCARB1-208ENST00000544327 RNF14Q9UBS8 474 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 BZW2Q9Y6E2 419 aaKnown RBP19.47■□□□□ 0.71
SCARB1-208ENST00000544327 GTPBP10A4D1E9 387 aaKnown RBP19.46■□□□□ 0.71
SCARB1-208ENST00000544327 RSPH10B2B2RC85 870 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 RSPH10BP0C881 870 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 PRELPP51888 382 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 DLGAP5Q15398 846 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 LRCH2Q5VUJ6 765 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 C1orf186Q6ZWK4 172 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 MTMR14Q8NCE2 650 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 EXOC4Q96A65 974 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 TLR10Q9BXR5 811 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 RGL1Q9NZL6 768 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 SMCHD1A6NHR9 2005 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 LOXHD1Q8IVV2 1947 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 SLITRK3O94933 977 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 EPB41P11171 864 aaKnown RBP19.46■□□□□ 0.71
SCARB1-208ENST00000544327 XRCC5P13010 732 aaKnown RBP19.46■□□□□ 0.71
SCARB1-208ENST00000544327 AARSP49588 968 aaKnown RBP eCLIP19.46■□□□□ 0.71
SCARB1-208ENST00000544327 KLHL30Q0D2K2 578 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 RTKN2Q8IZC4 609 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 MED4Q9NPJ6 270 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 KCND2Q9NZV8 630 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 SEL1LQ9UBV2 794 aa19.46■□□□□ 0.71
SCARB1-208ENST00000544327 MYH10P35580 1976 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 LRRIQ3A6PVS8 624 aaPredicted RBP19.45■□□□□ 0.7
SCARB1-208ENST00000544327 C21orf2O43822 256 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 AKAP3O75969 853 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 CFBP00751 764 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 SETQ01105 290 aaPredicted RBP19.45■□□□□ 0.7
SCARB1-208ENST00000544327 C2orf54Q08AI8 447 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 EPHA7Q15375 998 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 NFRKBQ6P4R8 1299 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 B3GNT9Q6UX72 402 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 CCNI2Q6ZMN8 369 aaPredicted RBP19.45■□□□□ 0.7
SCARB1-208ENST00000544327 SPATA4Q8NEY3 305 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 FAM71BQ8TC56 605 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 TBC1D5Q92609 795 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 DYDC2Q96IM9 177 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 WDR11Q9BZH6 1224 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 VPS33BQ9H267 617 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 PCDHGC5Q9Y5F6 944 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 FRMPD4Q14CM0 1322 aa19.45■□□□□ 0.7
SCARB1-208ENST00000544327 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 GCNT3O95395 438 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 UCHL3P15374 230 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 PON1P27169 355 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 PRKCIP41743 596 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 ZNF131P52739 623 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 APBA1Q02410 837 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 EXOC3L4Q17RC7 722 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 CEP55Q53EZ4 464 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 IRF2BP2Q7Z5L9 587 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 FAM83AQ86UY5 434 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 FAM133AQ8N9E0 248 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 BORCS6Q96GS4 357 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 ZMYM2Q9UBW7 1377 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 A0A087X0T9 212 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 TGFB1I1O43294 461 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 FAM13AO94988 1023 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 FAM228BP0C875 321 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 MAP3K10Q02779 954 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 CTTNQ14247 550 aaKnown RBP19.44■□□□□ 0.7
SCARB1-208ENST00000544327 SLC35C1Q96A29 364 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 DRC1Q96MC2 740 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 MKNK1Q9BUB5 465 aa19.44■□□□□ 0.7
SCARB1-208ENST00000544327 SLC9A1P19634 815 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 CCDC174Q6PII3 467 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 GBP6Q6ZN66 633 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 GPIHBP1Q8IV16 184 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 ANKRD13CQ8N6S4 541 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 NACC1Q96RE7 527 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 SIX2Q9NPC8 291 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
SCARB1-208ENST00000544327 ADAM21Q9UKJ8 722 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 ODF2LQ9ULJ1 636 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 NENFQ9UMX5 172 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 COL4A5P29400 1685 aa19.43■□□□□ 0.7
SCARB1-208ENST00000544327 CCDC66A2RUB6 948 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 GAS7O60861 476 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 ACTN1P12814 892 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 TNFRSF8P28908 595 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 PAFAH1B1P43034 410 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 JAM2P57087 298 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
SCARB1-208ENST00000544327 OGFOD1Q8N543 542 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 NEK9Q8TD19 979 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 PARVGQ9HBI0 331 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 STK32BQ9NY57 414 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 HPCAL4Q9UM19 191 aa19.42■□□□□ 0.7
SCARB1-208ENST00000544327 ZC3H4Q9UPT8 1303 aaKnown RBP19.42■□□□□ 0.7
SCARB1-208ENST00000544327 BUB1O43683 1085 aa19.41■□□□□ 0.7
SCARB1-208ENST00000544327 KLRC1P26715 233 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms