RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
UBE3C-205ENST00000470408 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
UBE3C-205ENST00000470408 RNF14Q9UBS8 474 aa10.3□□□□□ -0.76
UBE3C-205ENST00000470408 NOC2LQ9Y3T9 749 aaKnown RBP10.3□□□□□ -0.76
UBE3C-205ENST00000470408 PSMD14O00487 310 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ABL1P00519 1130 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 SCARF1Q14162 830 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 BEST2Q8NFU1 509 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 RAET1EQ8TD07 263 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 MTRQ99707 1265 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 HOMER3Q9NSC5 361 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 SLC8A2Q9UPR5 921 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 CLDN3O15551 220 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 HMGCS2P54868 508 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 TOB2Q14106 344 aaPredicted RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ZNF667Q5HYK9 610 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 SLC44A5Q8NCS7 719 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 PAGE5Q96GU1 130 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 MAP3K20Q9NYL2 800 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ZNF189O75820 626 aaPredicted RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ZNF827Q17R98 1081 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 CEP55Q53EZ4 464 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 RESP18Q5W5W9 173 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ARHGAP24Q8N264 748 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ADARB2Q9NS39 739 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 GGA3Q9NZ52 723 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 SMIM23A6NLE4 172 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 STXBP3O00186 592 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 IPO5O00410 1097 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ABCB4P21439 1286 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ETF1P62495 437 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ZBED6P86452 979 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 PDIA6Q15084 440 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ANGEL2Q5VTE6 544 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 BZW1Q7L1Q6 419 aaKnown RBP10.29□□□□□ -0.76
UBE3C-205ENST00000470408 LRRC8AQ8IWT6 810 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 XXYLT1Q8NBI6 393 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 TSC1Q92574 1164 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 NLRP4Q96MN2 994 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 MAN1B1Q9UKM7 699 aa10.29□□□□□ -0.76
UBE3C-205ENST00000470408 MAGEB2O15479 319 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 ZNF157P51786 506 aaPredicted RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CTTNQ14247 550 aaKnown RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 SIX6OS1Q8N1H7 587 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 MEIS1O00470 390 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 BFSP1Q12934 665 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CCDC38Q502W7 563 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 GAS2L3Q86XJ1 694 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 MIPOL1Q8TD10 442 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 ELP3Q9H9T3 547 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CPSF3Q9UKF6 684 aaKnown RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 ARL4AP40617 200 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 PEX3P56589 373 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 COL23A1Q86Y22 540 aaPredicted RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 EFCAB13Q8IY85 973 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CCHCR1Q8TD31 782 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 FBXO41Q8TF61 875 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 TRIM62Q9BVG3 475 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 KCND2Q9NZV8 630 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 IQGAP1P46940 1657 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 MAP7Q14244 749 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CEP85LQ5SZL2 805 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 GPT2Q8TD30 523 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 RNF139Q8WU17 664 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 RAD54LQ92698 747 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 SPATA33Q96N06 139 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 MRPL4Q9BYD3 311 aaKnown RBP10.28□□□□□ -0.76
UBE3C-205ENST00000470408 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 SLC9A2Q9UBY0 812 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 SCINQ9Y6U3 715 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 CAPN7Q9Y6W3 813 aa10.28□□□□□ -0.76
UBE3C-205ENST00000470408 GTF2A2P52657 109 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 APBA1Q02410 837 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 UAP1Q16222 522 aaPredicted RBP10.27□□□□□ -0.76
UBE3C-205ENST00000470408 ZNF449Q6P9G9 518 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 RDM1Q8NG50 284 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 PFDN4Q9NQP4 134 aa10.27□□□□□ -0.76
UBE3C-205ENST00000470408 ASAP2O43150 1006 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 NDUFB10O96000 172 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 MTMR2Q13614 643 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 Q3C1V9 767 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 ENOSF1Q7L5Y1 443 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
UBE3C-205ENST00000470408 RABGGTAQ92696 567 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms