RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 PAK2Q13177 524 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 ITGB3BPQ13352 177 aaPredicted RBP21.51■■□□□ 1.03
SRSF4-202ENST00000466448 CSPP1Q1MSJ5 1256 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 PLPPR4Q7Z2D5 763 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 NPAS4Q8IUM7 802 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 CMTR2Q8IYT2 770 aaKnown RBP21.51■■□□□ 1.03
SRSF4-202ENST00000466448 TNPO1Q92973 898 aaKnown RBP21.51■■□□□ 1.03
SRSF4-202ENST00000466448 P2RX5Q93086 422 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
SRSF4-202ENST00000466448 MBTPS2O43462 519 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 IRS1P35568 1242 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 NAPAP54920 295 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 CEP55Q53EZ4 464 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 APOA5Q6Q788 366 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 CELF4Q9BZC1 486 aaKnown RBP21.5■■□□□ 1.03
SRSF4-202ENST00000466448 AGO4Q9HCK5 861 aaKnown RBP21.5■■□□□ 1.03
SRSF4-202ENST00000466448 ANO2Q9NQ90 1003 aa21.5■■□□□ 1.03
SRSF4-202ENST00000466448 ITGB1P05556 798 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 SCG2P13521 617 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 FUT2Q10981 343 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 PAN2Q504Q3 1202 aaKnown RBP21.49■■□□□ 1.03
SRSF4-202ENST00000466448 PPP1R18Q6NYC8 613 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 TMX1Q9H3N1 280 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 ATG2AQ2TAZ0 1938 aa21.49■■□□□ 1.03
SRSF4-202ENST00000466448 SMIM35A0A1B0GVV1 85 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 ATG7O95352 703 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 STAG3L1P0CL83 205 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 GATMP50440 423 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 ADCY7P51828 1080 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 KRT76Q01546 638 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 ADAM15Q13444 863 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 SMAD4Q13485 552 aaKnown RBP21.48■■□□□ 1.03
SRSF4-202ENST00000466448 TMEM266Q2M3C6 531 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 NAALADL2Q58DX5 795 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 SYNE3Q6ZMZ3 975 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 ADGRD2Q7Z7M1 963 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 KLHL23Q8NBE8 558 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 SPPL3Q8TCT6 385 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 ANO3Q9BYT9 981 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 RBM28Q9NW13 759 aaKnown RBP21.48■■□□□ 1.03
SRSF4-202ENST00000466448 TMEM260Q9NX78 707 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 KDM3AQ9Y4C1 1321 aa21.48■■□□□ 1.03
SRSF4-202ENST00000466448 MEIS1O00470 390 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 CCNE2O96020 404 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 FOSP01100 380 aaPredicted RBP21.47■■□□□ 1.03
SRSF4-202ENST00000466448 TEX2Q8IWB9 1127 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 NME8Q8N427 588 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 POP1Q99575 1024 aaKnown RBP21.47■■□□□ 1.03
SRSF4-202ENST00000466448 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
SRSF4-202ENST00000466448 CD207Q9UJ71 328 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
SRSF4-202ENST00000466448 TTC3P53804 2025 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 IGKV6D-21A0A0A0MT36 114 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 STXBP3O00186 592 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 SREBF1P36956 1147 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 NDUFV1P49821 464 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 SLC26A2P50443 739 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 MSLNLQ96KJ4 702 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
SRSF4-202ENST00000466448 V9GY48 417 aaPredicted RBP21.46■■□□□ 1.03
SRSF4-202ENST00000466448 C5orf42Q9H799 3197 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
SRSF4-202ENST00000466448 IBSPP21815 317 aaPredicted RBP21.45■■□□□ 1.02
SRSF4-202ENST00000466448 KLRC1P26715 233 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 CLK2P49760 499 aaKnown RBP21.45■■□□□ 1.02
SRSF4-202ENST00000466448 NFX1Q12986 1120 aaKnown RBP21.45■■□□□ 1.02
SRSF4-202ENST00000466448 AP3B2Q13367 1082 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 RTN1Q16799 776 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 ABHD15Q6UXT9 468 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 EFHBQ8N7U6 833 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 POF1BQ8WVV4 589 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 PPP2R3CQ969Q6 453 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 NEK1Q96PY6 1258 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 BARHL2Q9NY43 387 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 CLEC1BQ9P126 229 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 MUTYHQ9UIF7 546 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 LRFN2Q9ULH4 789 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 GINS2Q9Y248 185 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 MUC6Q6W4X9 2439 aa21.45■■□□□ 1.02
SRSF4-202ENST00000466448 hCG_1984214I3L0E3 225 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 BACH1O14867 736 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 ZBTB43O43298 467 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 MGEA5O60502 916 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 SARSP49591 514 aaKnown RBP21.44■■□□□ 1.02
SRSF4-202ENST00000466448 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
SRSF4-202ENST00000466448 RNF20Q5VTR2 975 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 HFE2Q6ZVN8 426 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 RNF135Q8IUD6 432 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 CCDC60Q8IWA6 550 aaPredicted RBP21.44■■□□□ 1.02
SRSF4-202ENST00000466448 KIAA0319LQ8IZA0 1049 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 ZNF713Q8N859 430 aaPredicted RBP21.44■■□□□ 1.02
SRSF4-202ENST00000466448 ATP8B4Q8TF62 1192 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 TMEM40Q8WWA1 233 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 CDHR5Q9HBB8 845 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 ERVK-5Q9HDB9 667 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
SRSF4-202ENST00000466448 PCDHGC5Q9Y5F6 944 aa21.44■■□□□ 1.02
SRSF4-202ENST00000466448 KAT6AQ92794 2004 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms