RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 NACC1Q96RE7 527 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 C16orf70Q9BSU1 422 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 MCOLN1Q9GZU1 580 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 ERAP1Q9NZ08 941 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-210ENST00000449116 ZNF862O60290 1169 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 ZNF202O95125 648 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 YWHABP31946 246 aaKnown RBP16.36■□□□□ 0.21
SHANK2-210ENST00000449116 PRKCEQ02156 737 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 PCSK9Q8NBP7 692 aaKnown RBP16.36■□□□□ 0.21
SHANK2-210ENST00000449116 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 FAM167AQ96KS9 214 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 CUEDC2Q9H467 287 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 STK17AQ9UEE5 414 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 USP25Q9UHP3 1055 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
SHANK2-210ENST00000449116 E9PMD0 336 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 H3BRB1 525 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 NR1I2O75469 434 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 F2P00734 622 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 OATP04181 439 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 XRCC6P12956 609 aaKnown RBP eCLIP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 ATP4AP20648 1035 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 PSMC6P62333 389 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 PURAQ00577 322 aaKnown RBP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 LRRC41Q15345 812 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 CCSAPQ6IQ19 270 aaPredicted RBP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 KCNK18Q7Z418 384 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 PIGOQ8TEQ8 1089 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 LRRC15Q8TF66 581 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 LARP4BQ92615 738 aaKnown RBP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 RAD54LQ92698 747 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 KATNAL1Q9BW62 490 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 TUT1Q9H6E5 874 aaKnown RBP16.35■□□□□ 0.21
SHANK2-210ENST00000449116 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 CENPFP49454 3210 aa16.35■□□□□ 0.21
SHANK2-210ENST00000449116 ACTN4O43707 911 aaKnown RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 STBD1O95210 358 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 EYA4O95677 639 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 SLFN14P0C7P3 912 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 MARK3P27448 753 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 PLCB4Q15147 1175 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 KCNA10Q16322 511 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 LONRF3Q496Y0 759 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 OTUD6AQ7L8S5 288 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 CEP57L1Q8IYX8 460 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 KAT2BQ92831 832 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 TIGD1Q96MW7 591 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 MAGEF1Q9HAY2 307 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 NRBP2Q9NSY0 501 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 SEPT9Q9UHD8 586 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 SERTAD1Q9UHV2 236 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 DBR1Q9UK59 544 aaKnown RBP16.34■□□□□ 0.21
SHANK2-210ENST00000449116 OGDHLQ9ULD0 1010 aa16.34■□□□□ 0.21
SHANK2-210ENST00000449116 FRMPD3Q5JV73 1810 aa16.33■□□□□ 0.21
SHANK2-210ENST00000449116 A0A087WWV3 80 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 MOXD2PA6NHM9 499 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 ZBTB39O15060 712 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 ASGR1P07306 291 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 GJB1P08034 283 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 PLA2G4BP0C869 781 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 ANO5Q75V66 913 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
SHANK2-210ENST00000449116 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
SHANK2-210ENST00000449116 CCDC34Q96HJ3 373 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.2
SHANK2-210ENST00000449116 TSEN34Q9BSV6 310 aaKnown RBP16.33■□□□□ 0.2
SHANK2-210ENST00000449116 NIFKQ9BYG3 293 aaKnown RBP16.33■□□□□ 0.2
SHANK2-210ENST00000449116 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
SHANK2-210ENST00000449116 TMEM150BA6NC51 233 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 HAS3O00219 553 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 HBP1O60381 514 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 CAPN15O75808 1086 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 CABYRO75952 493 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 SGPL1O95470 568 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
SHANK2-210ENST00000449116 RARRES1P49788 294 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 PSEN2P49810 448 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 MCM6Q14566 821 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 MFSD10Q14728 455 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 KIAA0753Q2KHM9 967 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 WDR81Q562E7 1941 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 PLA2G4FQ68DD2 849 aa16.32■□□□□ 0.2
SHANK2-210ENST00000449116 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms