RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 ZBTB10Q96DT7 871 aa17.49■□□□□ 0.39
CLCN6-207ENST00000376497 FAM49AQ9H0Q0 323 aaPredicted RBP17.49■□□□□ 0.39
CLCN6-207ENST00000376497 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
CLCN6-207ENST00000376497 IGSF9BQ9UPX0 1349 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 KDM3AQ9Y4C1 1321 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
CLCN6-207ENST00000376497 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 M0QZ92 97 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 STAT5BP51692 787 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 ACTR2P61160 394 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 NPAS4Q8IUM7 802 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 SDF4Q9BRK5 362 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 CELF4Q9BZC1 486 aaKnown RBP17.48■□□□□ 0.39
CLCN6-207ENST00000376497 ALG13Q9NP73 1137 aaKnown RBP17.48■□□□□ 0.39
CLCN6-207ENST00000376497 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
CLCN6-207ENST00000376497 MRPL42Q9Y6G3 142 aaKnown RBP17.48■□□□□ 0.39
CLCN6-207ENST00000376497 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 SMIM35A0A1B0GVV1 85 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 TBX10O75333 385 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 CDC45O75419 566 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 FOSP01100 380 aaPredicted RBP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 STAG3L1P0CL83 205 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 ARP10275 920 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 CPA1P15085 419 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 GTF2F1P35269 517 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 IRS1P35568 1242 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 ADAM15Q13444 863 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 TYW1BQ6NUM6 668 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 SPPL3Q8TCT6 385 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 TRAPPC12Q8WVT3 735 aa17.47■□□□□ 0.39
CLCN6-207ENST00000376497 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 AGO4Q9HCK5 861 aaKnown RBP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
CLCN6-207ENST00000376497 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
CLCN6-207ENST00000376497 C5orf42Q9H799 3197 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 ITGB1P05556 798 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 DNAJB1P25685 340 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 SLC26A2P50443 739 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 TMEM62Q0P6H9 643 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 PAK2Q13177 524 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 ITGB3BPQ13352 177 aaPredicted RBP17.46■□□□□ 0.39
CLCN6-207ENST00000376497 SMAD4Q13485 552 aaKnown RBP17.46■□□□□ 0.39
CLCN6-207ENST00000376497 CEP55Q53EZ4 464 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 PPP1R18Q6NYC8 613 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 MTHFD1LQ6UB35 978 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 POP1Q99575 1024 aaKnown RBP17.46■□□□□ 0.39
CLCN6-207ENST00000376497 IGFLR1Q9H665 355 aa17.46■□□□□ 0.39
CLCN6-207ENST00000376497 MEIS1O00470 390 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 LINC01565O15544 149 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 SCG2P13521 617 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 CLK2P49760 499 aaKnown RBP17.45■□□□□ 0.38
CLCN6-207ENST00000376497 NAPAP54920 295 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 FUT2Q10981 343 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 CLUL1Q15846 466 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 MSLNLQ96KJ4 702 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 UIMC1Q96RL1 719 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 KCNH6Q9H252 994 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 TMX1Q9H3N1 280 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 CD207Q9UJ71 328 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
CLCN6-207ENST00000376497 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 HBP1O60381 514 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 EYA4O95677 639 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 KLRC1P26715 233 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 KRT76Q01546 638 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
CLCN6-207ENST00000376497 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 PAN2Q504Q3 1202 aaKnown RBP17.44■□□□□ 0.38
CLCN6-207ENST00000376497 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 ADGRD2Q7Z7M1 963 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
CLCN6-207ENST00000376497 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 NEK1Q96PY6 1258 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 BRPF3Q9ULD4 1205 aa17.44■□□□□ 0.38
CLCN6-207ENST00000376497 SMCO2A6NFE2 343 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 STXBP3O00186 592 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 CSPG5O95196 566 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 SREBF1P36956 1147 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
CLCN6-207ENST00000376497 ADCY7P51828 1080 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
CLCN6-207ENST00000376497 RNF20Q5VTR2 975 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 EFHBQ8N7U6 833 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 GLT8D2Q9H1C3 349 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 ERVK-5Q9HDB9 667 aa17.43■□□□□ 0.38
CLCN6-207ENST00000376497 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms