RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 UBA7P41226 1012 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 RANBP1P43487 201 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 PLS1Q14651 629 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 SLC17A8Q8NDX2 589 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 TMX4Q9H1E5 349 aaPredicted RBP22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 CCDC134Q9H6E4 229 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 ENOX2Q16206 610 aaKnown RBP22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 CNKSR2Q8WXI2 1034 aa22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 GORASP1Q9BQQ3 440 aa22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 TXLNGYQ9BZA5 131 aa22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 LUC7LQ9NQ29 371 aaKnown RBP22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 WDR35Q9P2L0 1181 aa22.39■■□□□ 1.17
TMEFF1-201ENST00000374879 PGRMC1O00264 195 aaKnown RBP22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 HIP1RO75146 1068 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 SERPING1P05155 500 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 ASIC1P78348 528 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 KCNMA1Q12791 1236 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 PPP2R5BQ15173 497 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 DTHD1Q6ZMT9 781 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 KLHL23Q8NBE8 558 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 IFT74Q96LB3 600 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 ANKRD27Q96NW4 1050 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 CNGA1P29973 690 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 USP11P51784 963 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 MRPS35P82673 323 aaKnown RBP22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 ARID5AQ03989 594 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 SFMBT2Q5VUG0 894 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 SUSD4Q5VX71 490 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 METTL13Q8N6R0 699 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 KIAA0895Q8NCT3 520 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 PGM2Q96G03 612 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 PLCD4Q9BRC7 762 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 ADAMTS1Q9UHI8 967 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 RTL9Q8NET4 1388 aa22.38■■□□□ 1.17
TMEFF1-201ENST00000374879 SMIM22K7EJ46 135 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 ALDH3A1P30838 453 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 PDE6CP51160 858 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 SLC18A3Q16572 532 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 ARHGAP22Q7Z5H3 698 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 TRIM74Q86UV6 250 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 TRIM73Q86UV7 250 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 LMNTD2Q8IXW0 634 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 LCORLQ8N3X6 602 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 FMO2Q99518 471 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 TRIM51Q9BSJ1 452 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 TRIM9Q9C026 710 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 G3BP2Q9UN86 482 aaKnown RBP22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 LRP5O75197 1615 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 SLIT2O94813 1529 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 FITM2Q8N6M3 262 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 SEC14L1Q92503 715 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 MTA3Q9BTC8 594 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 TMEM60Q9H2L4 133 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 GOPCQ9HD26 462 aa22.37■■□□□ 1.17
TMEFF1-201ENST00000374879 HGSO14964 777 aaPredicted RBP22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 RGS16O15492 202 aaPredicted RBP22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 FAM114A2Q9NRY5 505 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 FGFR1OP2Q9NVK5 253 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 UTP11Q9Y3A2 253 aaKnown RBP22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 TIAM2Q8IVF5 1701 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 BCAMP50895 628 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 CENPPQ6IPU0 288 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 TMEM154Q6P9G4 183 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 SPATA21Q7Z572 469 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 GBP7Q8N8V2 638 aaPredicted RBP22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 RPS6KC1Q96S38 1066 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 NACAP1Q9BZK3 213 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 MYH4Q9Y623 1939 aa22.36■■□□□ 1.17
TMEFF1-201ENST00000374879 USP4Q13107 963 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 LBRQ14739 615 aaKnown RBP22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 RNF220Q5VTB9 566 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 MIGA1Q8NAN2 632 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ATP8B4Q8TF62 1192 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 RNF25Q96BH1 459 aaPredicted RBP22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ATP6V0A2Q9Y487 856 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ARAP2Q8WZ64 1704 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 CCDC188H7C350 402 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 FLOT1O75955 427 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ZBTB48P10074 688 aaPredicted RBP22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 PLCG1P19174 1290 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ATP6V1C1P21283 382 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 RAD23BP54727 409 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 CCDC38Q502W7 563 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 DNAAF5Q86Y56 855 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 TRIM4Q9C037 500 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 ZMYND12Q9H0C1 365 aa22.35■■□□□ 1.17
TMEFF1-201ENST00000374879 TTC36A6NLP5 189 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 WFS1O76024 890 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 NOL4O94818 638 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 SUN1O94901 812 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 NUDT17P0C025 328 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 PYGBP11216 843 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 CNGA2Q16280 664 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 CATIPQ7Z7H3 387 aa22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 UTP4Q969X6 686 aaKnown RBP22.34■■□□□ 1.17
TMEFF1-201ENST00000374879 SLITRK6Q9H5Y7 841 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms