RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 IER2Q9BTL4 223 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 TANGO6Q9C0B7 1094 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 VPS11Q9H270 941 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 WASF3Q9UPY6 502 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 ZDHHC9Q9Y397 364 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 DAPK1P53355 1430 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 ZC3H13Q5T200 1668 aaKnown RBP6.55□□□□□ -1.36
PMS1-202ENST00000374826 A2MP01023 1474 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 DEPDC5O75140 1603 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 IQCA1LA6NCM1 817 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 PATE3B3GLJ2 98 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 LCP1P13796 627 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 LSAMPQ13449 338 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 SLFN13Q68D06 897 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 USP51Q70EK9 711 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 KLHL36Q8N4N3 616 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 ST13P5Q8NFI4 369 aaPredicted RBP6.55□□□□□ -1.36
PMS1-202ENST00000374826 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 C8orf37Q96NL8 207 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 TMEM209Q96SK2 561 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
PMS1-202ENST00000374826 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 PCDHB4Q9Y5E5 795 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 AGLP35573 1532 aa6.55□□□□□ -1.36
PMS1-202ENST00000374826 CAMSAP1Q5T5Y3 1602 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 MROH1Q8NDA8 1641 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 ARID4BQ4LE39 1312 aaPredicted RBP6.54□□□□□ -1.36
PMS1-202ENST00000374826 ABCC5O15440 1437 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
PMS1-202ENST00000374826 NFATC3Q12968 1075 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 FAM50AQ14320 339 aaKnown RBP6.54□□□□□ -1.36
PMS1-202ENST00000374826 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
PMS1-202ENST00000374826 EMC4Q5J8M3 183 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 PALM2Q8IXS6 379 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 FTSJ1Q9UET6 329 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 PCDHA2Q9Y5H9 948 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 NPFFR2Q9Y5X5 522 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 MYO5BQ9ULV0 1848 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 PREX1Q8TCU6 1659 aa6.54□□□□□ -1.36
PMS1-202ENST00000374826 RTEL1-TNFRSF6BF6WH68 1400 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 DLX3O60479 287 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 ZNF623O75123 536 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.53□□□□□ -1.36
PMS1-202ENST00000374826 WRNIP1Q96S55 665 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 SEMA4AQ9H3S1 761 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 SLITRK6Q9H5Y7 841 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 BARX1Q9HBU1 254 aaPredicted RBP6.53□□□□□ -1.36
PMS1-202ENST00000374826 ARHGEF4Q9NR80 690 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
PMS1-202ENST00000374826 TESMINQ9Y4I5 508 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 DUOX2Q9NRD8 1548 aa6.53□□□□□ -1.36
PMS1-202ENST00000374826 RRBP1Q9P2E9 1410 aaKnown RBP6.52□□□□□ -1.37
PMS1-202ENST00000374826 TRMT10BQ6PF06 316 aaKnown RBP6.52□□□□□ -1.37
PMS1-202ENST00000374826 USP53Q70EK8 1073 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 LRRC47Q8N1G4 583 aaKnown RBP6.52□□□□□ -1.37
PMS1-202ENST00000374826 Q8TCH9 128 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 SMOC1Q9H4F8 434 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 CLDND1Q9NY35 253 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 TCAF1Q9Y4C2 921 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 ADGRL2O95490 1459 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 UNC13BO14795 1591 aa6.52□□□□□ -1.37
PMS1-202ENST00000374826 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 PRODHO43272 600 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 DGKIO75912 1065 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 FGFR1P11362 822 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.37
PMS1-202ENST00000374826 SELENOPP49908 381 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 TMC5Q6UXY8 1006 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 ZNF669Q96BR6 464 aaPredicted RBP6.51□□□□□ -1.37
PMS1-202ENST00000374826 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 GPR27Q9NS67 375 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 ADAM29Q9UKF5 820 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 HS3ST3A1Q9Y663 406 aa6.51□□□□□ -1.37
PMS1-202ENST00000374826 PTPRKQ15262 1439 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 PRDM15P57071 1507 aaPredicted RBP6.5□□□□□ -1.37
PMS1-202ENST00000374826 MYO3AQ8NEV4 1616 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 ZNF142P52746 1687 aaPredicted RBP6.5□□□□□ -1.37
PMS1-202ENST00000374826 PTPRMP28827 1452 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 KIF15Q9NS87 1388 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 MUSKO15146 869 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 PDPK1O15530 556 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 TSPY4P0CV99 314 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 TSPY10P0CW01 314 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 COL6A1P12109 1028 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 SPDYAQ5MJ70 313 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 NUDT10Q8NFP7 164 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 PHOSPHO1Q8TCT1 267 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 MEGF9Q9H1U4 602 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 EPB41L1Q9H4G0 881 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 RBPJLQ9UBG7 517 aa6.5□□□□□ -1.37
PMS1-202ENST00000374826 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms