RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 SURF1Q15526 300 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF449Q6P9G9 518 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 LCA5Q86VQ0 697 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 PIGOQ8TEQ8 1089 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 FAM81BQ96LP2 452 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ELP3Q9H9T3 547 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 SETBP1Q9Y6X0 1596 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 PFDN6O15212 129 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 SLFN14P0C7P3 912 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 EEF1GP26641 437 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MAPK4P31152 587 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MAN2A1Q16706 1144 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 WHAMMP3Q1A5X7 153 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 TTC31Q49AM3 519 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ELMOD1Q8N336 334 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 BAG5Q9UL15 447 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF233A6NK53 670 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ESRRBO95718 433 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MYL1P05976 194 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ACCSLQ4AC99 568 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MFSD14CQ5VZR4 134 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 TRIM68Q6AZZ1 485 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 SIX6OS1Q8N1H7 587 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MAP10Q9P2G4 905 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 HNRNPCL2B2RXH8 293 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 K7ERI5 159 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 NEMP1O14524 444 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 HNRNPCL1O60812 293 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ALCAMQ13740 583 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 LRRC4Q9HBW1 653 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 RWDD2AQ9UIY3 292 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 DDX41Q9UJV9 622 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF148Q9UQR1 794 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 POC1B-GALNT4F8VUJ3 575 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 GFPT2O94808 682 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 YWHAGP61981 247 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 RBL2Q08999 1139 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MAP7Q14244 749 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 FASTKD5Q7L8L6 764 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 NSUN6Q8TEA1 469 aaKnown RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 FAM167AQ96KS9 214 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF302Q9NR11 478 aa10.58□□□□□ -0.72
COL4A6-202ENST00000372216 MYO1FO00160 1098 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 GNGT2O14610 69 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 GSTA4O15217 222 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 FCER1AP12319 257 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 TTLL4Q14679 1199 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 GRM4Q14833 912 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 RNF219Q5W0B1 726 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-202ENST00000372216 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 TEX2Q8IWB9 1127 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 BBS5Q8N3I7 341 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L15C9J2P7 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L13C9JLJ4 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L11C9JVI0 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L18D6R9N7 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L22D6RA61 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L17D6RBQ6 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L19D6RCP7 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L20D6RJB6 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L24Q0WX57 530 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 USP17L6PQ6QN14 398 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 BHMT2Q9H2M3 363 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 COG7P83436 770 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 PPP2R5EQ16537 467 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 SLFN12LQ6IEE8 588 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 HSPH1Q92598 858 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 ZNRF3Q9ULT6 936 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 DENND3A2RUS2 1198 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 SPECC1L-ADORA2AF8WAN1 911 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 TBCCQ15814 346 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 RESTQ13127 1097 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 PPP1R18Q6NYC8 613 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 ANKRD13CQ8N6S4 541 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 ENAHQ8N8S7 591 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-202ENST00000372216 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 IFT122Q9HBG6 1241 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 SLC8A2Q9UPR5 921 aa10.57□□□□□ -0.72
COL4A6-202ENST00000372216 EPN1Q9Y6I3 576 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-202ENST00000372216 CACNB2Q08289 660 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-202ENST00000372216 FAM117BQ6P1L5 589 aa10.56□□□□□ -0.72
COL4A6-202ENST00000372216 DNAAF3Q8N9W5 541 aa10.56□□□□□ -0.72
COL4A6-202ENST00000372216 THAP9Q9H5L6 903 aa10.56□□□□□ -0.72
COL4A6-202ENST00000372216 AFF4Q9UHB7 1163 aaKnown RBP10.56□□□□□ -0.72
COL4A6-202ENST00000372216 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
COL4A6-202ENST00000372216 KRT1P04264 644 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms