RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RANBP6O60518 1105 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 WFS1O76024 890 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 KIF23Q02241 960 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 PPIDQ08752 370 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 PDAP1Q13442 181 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 KRT31Q15323 416 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RESP18Q5W5W9 173 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TRAF7Q6Q0C0 670 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 CCDC124Q96CT7 223 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 NMD3Q96D46 503 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 ALDH8A1Q9H2A2 487 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 L3MBTL1Q9Y468 752 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 SYNGAP1Q96PV0 1343 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 ATP10BO94823 1461 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 KIAA0232Q92628 1395 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 ZCCHC11Q5TAX3 1644 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 A0A0G2JND7 137 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 A0A1W2PQC6 194 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 FAM187AA6NFU0 413 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 MINDY4BA8MYZ0 360 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 IGHMBP2P38935 993 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 TRIM60Q495X7 471 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 C9orf131Q5VYM1 1079 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 CRLF3Q8IUI8 442 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 SPATA17Q96L03 361 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 RPAP3Q9H6T3 665 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 ORC6Q9Y5N6 252 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PTCH1Q13635 1447 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PI4KAP2A4QPH2 592 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 MATN2O00339 956 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TRIM16O95361 564 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 TBCCQ15814 346 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 ZNF827Q17R98 1081 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 CHST3Q7LGC8 479 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PI4KAP1Q8N8J0 262 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 PRAM1Q96QH2 718 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 ZNF184Q99676 751 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 ROPN1BQ9BZX4 212 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 ROPN1Q9HAT0 212 aaPredicted RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 RNPEPL1Q9HAU8 725 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 DNAJC17Q9NVM6 304 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 DNAAF2Q9NVR5 837 aaKnown RBP5.4□□□□□ -1.54
SKP1-202ENST00000353411 MAD1L1Q9Y6D9 718 aa5.4□□□□□ -1.54
SKP1-202ENST00000353411 A0A1B0GTH6 734 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 CLASP2O75122 1294 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 FMNL1O95466 1100 aaPredicted RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 HSPA8P11142 646 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 BRAFP15056 766 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 TMOD1P28289 359 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 ZNF76P36508 570 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 FSCBQ5H9T9 825 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 OTUD6AQ7L8S5 288 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 ERP27Q96DN0 273 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 CEP19Q96LK0 163 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 FAM227BQ96M60 508 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 ANKFY1Q9P2R3 1169 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 ADGRA3Q8IWK6 1321 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 PRLRP16471 622 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 TRPC7Q9HCX4 862 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 MAP3K2Q9Y2U5 619 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 MLH3Q9UHC1 1453 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 GRM8O00222 908 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 PRPF6O94906 941 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 ARFIP2P53365 341 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 DCAF17Q5H9S7 520 aaPredicted RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 ZMYM1Q5SVZ6 1142 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 LIN9Q5TKA1 542 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 TUBA3EQ6PEY2 450 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 FAM47EQ6ZV65 393 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 TLK2Q86UE8 772 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 TC2NQ8N9U0 490 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 CNBD1Q8NA66 436 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 OMA1Q96E52 524 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 CNOT6LQ96LI5 555 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 LSM14BQ9BX40 385 aaKnown RBP5.4□□□□□ -1.55
SKP1-202ENST00000353411 TMBIM4Q9HC24 238 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 CHD4Q14839 1912 aa5.4□□□□□ -1.55
SKP1-202ENST00000353411 A0A1B0GW55 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TRAPPC3O43617 180 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L2P0CJ85 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L3P0CJ86 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L4P0CJ87 422 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L5P0CJ88 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L6P0CJ89 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4L7P0CJ90 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PDE4BQ07343 736 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 TRIM65Q6PJ69 517 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MB21D1Q8N884 522 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 RBM46Q8TBY0 533 aaKnown RBP5.39□□□□□ -1.55
SKP1-202ENST00000353411 DTX3LQ8TDB6 740 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 SLC26A7Q8TE54 656 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 MAML1Q92585 1016 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 ISCUQ9H1K1 167 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 PPCSQ9HAB8 311 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 DUX4Q9UBX2 424 aa5.39□□□□□ -1.55
SKP1-202ENST00000353411 CDK13Q14004 1512 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms