RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 VPS38Q05919 439 aa-1.66□□□□□ -2.68
snR53snR53 DXO1Q06349 442 aa-1.66□□□□□ -2.68
snR53snR53 TCO89Q08921 799 aa-1.66□□□□□ -2.68
snR53snR53 VPS68Q12016 184 aa-1.66□□□□□ -2.68
snR53snR53 AEP3Q12089 606 aa-1.66□□□□□ -2.68
snR53snR53 NAB3P38996 802 aaKnown RBP RIP-Chip data-1.67□□□□□ -2.68not detected
snR53snR53 AIP1P46680 615 aaKnown RBP-1.67□□□□□ -2.68
snR53snR53 PEX14P53112 341 aa-1.67□□□□□ -2.68
snR53snR53 PEX8P53248 589 aa-1.67□□□□□ -2.68
snR53snR53 IPI3P53877 555 aa-1.67□□□□□ -2.68
snR53snR53 RMI1Q02685 241 aa-1.67□□□□□ -2.68
snR53snR53 YOL029CQ08187 201 aa-1.67□□□□□ -2.68
snR53snR53 RMD5Q12508 421 aa-1.67□□□□□ -2.68
snR53snR53 HIS4P00815 799 aaKnown RBP-1.68□□□□□ -2.68
snR53snR53 RRP1P35178 278 aaPredicted RBP-1.68□□□□□ -2.68
snR53snR53 YKR045CP36138 183 aa-1.68□□□□□ -2.68
snR53snR53 YBR241CP38142 488 aa-1.68□□□□□ -2.68
snR53snR53 YJR142WP47173 342 aa-1.68□□□□□ -2.68
snR53snR53 HMS2P47175 358 aa-1.68□□□□□ -2.68
snR53snR53 MRX11Q03079 207 aa-1.68□□□□□ -2.68
snR53snR53 CCE1Q03702 353 aa-1.68□□□□□ -2.68
snR53snR53 CSI1Q04368 295 aa-1.68□□□□□ -2.68
snR53snR53 SKI7Q08491 747 aaPredicted RBP-1.68□□□□□ -2.68
snR53snR53 RAX1Q08760 435 aa-1.68□□□□□ -2.68
snR53snR53 STE2D6VTK4 431 aa-1.69□□□□□ -2.68
snR53snR53 PIS1P06197 220 aaKnown RBP-1.69□□□□□ -2.68
snR53snR53 SST2P11972 698 aaKnown RBP-1.69□□□□□ -2.68
snR53snR53 CLN1P20437 546 aa-1.69□□□□□ -2.68
snR53snR53 YCL068CP25593 260 aa-1.69□□□□□ -2.68
snR53snR53 MAL33P38157 468 aa-1.69□□□□□ -2.68
snR53snR53 CTK3P46963 296 aaPredicted RBP-1.69□□□□□ -2.68
snR53snR53 IMD4P50094 524 aaKnown RBP-1.69□□□□□ -2.68
snR53snR53 NOP7P53261 605 aaKnown RBP-1.69□□□□□ -2.68
snR53snR53 YIF1P53845 314 aaKnown RBP-1.69□□□□□ -2.68
snR53snR53 PRP38Q00723 242 aaPredicted RBP-1.69□□□□□ -2.68
snR53snR53 OAZ1Q02803 292 aa-1.69□□□□□ -2.68
snR53snR53 YMR244WQ04018 355 aa-1.69□□□□□ -2.68
snR53snR53 LOT6Q07923 191 aa-1.69□□□□□ -2.68
snR53snR53 SSB1P11484 613 aaKnown RBP-1.7□□□□□ -2.68
snR53snR53 OCA5P38738 679 aa-1.7□□□□□ -2.68
snR53snR53 SSB2P40150 613 aaKnown RBP-1.7□□□□□ -2.68
snR53snR53 PHB2P50085 310 aa-1.7□□□□□ -2.68
snR53snR53 ROG1P53118 685 aa-1.7□□□□□ -2.68
snR53snR53 RNH201P53942 307 aa-1.7□□□□□ -2.68
snR53snR53 MZM1Q03429 123 aaPredicted RBP-1.7□□□□□ -2.68
snR53snR53 GMC1Q04399 608 aa-1.7□□□□□ -2.68
snR53snR53 FMP40Q08968 688 aaPredicted RBP-1.7□□□□□ -2.68
snR53snR53 MCT1Q12283 360 aa-1.7□□□□□ -2.68
snR53snR53 MRX4Q12467 430 aa-1.7□□□□□ -2.68
snR53snR53 ILV5P06168 395 aaKnown RBP-1.71□□□□□ -2.68
snR53snR53 NUC1P08466 329 aa-1.71□□□□□ -2.68
snR53snR53 SPO12P17123 173 aa-1.71□□□□□ -2.68
snR53snR53 MRP20P32387 263 aa-1.71□□□□□ -2.68
snR53snR53 THI2P38141 450 aa-1.71□□□□□ -2.68
snR53snR53 ECO1P43605 281 aa-1.71□□□□□ -2.68
snR53snR53 PRM1P53835 661 aa-1.71□□□□□ -2.68
snR53snR53 SED5Q01590 340 aa-1.71□□□□□ -2.68
snR53snR53 RCO1Q04779 684 aa-1.71□□□□□ -2.68
snR53snR53 YHC1Q05900 231 aaKnown RBP-1.71□□□□□ -2.68
snR53snR53 YOL019WQ08157 551 aa-1.71□□□□□ -2.68
snR53snR53 FCY22Q12119 530 aa-1.71□□□□□ -2.68
snR53snR53 ATP10P18496 279 aa-1.72□□□□□ -2.68
snR53snR53 SHE3P38272 425 aaKnown RBP-1.72□□□□□ -2.68
snR53snR53 AAD10P47182 288 aa-1.72□□□□□ -2.68
snR53snR53 APC4Q04601 652 aa-1.72□□□□□ -2.68
snR53snR53 YPL272CQ08984 517 aa-1.72□□□□□ -2.68
snR53snR53 YDL199CQ12407 687 aa-1.72□□□□□ -2.68
snR53snR53 TMA17Q12513 150 aa-1.72□□□□□ -2.68
snR53snR53 YIH1P25637 258 aa-1.73□□□□□ -2.69
snR53snR53 TEF4P36008 412 aaKnown RBP-1.73□□□□□ -2.69
snR53snR53 GLE2P40066 365 aa-1.73□□□□□ -2.69
snR53snR53 SSU72P53538 206 aaPredicted RBP-1.73□□□□□ -2.69
snR53snR53 EBS1Q03466 884 aaKnown RBP-1.73□□□□□ -2.69
snR53snR53 API2Q04413 109 aa-1.73□□□□□ -2.69
snR53snR53 HSP31Q04432 237 aa-1.73□□□□□ -2.69
snR53snR53 SUE1Q06524 206 aa-1.73□□□□□ -2.69
snR53snR53 REX4Q08237 289 aa-1.73□□□□□ -2.69
snR53snR53 HTZ1Q12692 134 aaKnown RBP-1.73□□□□□ -2.69
snR53snR53 DBF20P32328 564 aa-1.74□□□□□ -2.69
snR53snR53 CNS1P33313 385 aa-1.74□□□□□ -2.69
snR53snR53 AUR1P36107 401 aaPredicted RBP-1.74□□□□□ -2.69
snR53snR53 CCT2P39076 527 aaKnown RBP-1.74□□□□□ -2.69
snR53snR53 ALG5P40350 334 aa-1.74□□□□□ -2.69
snR53snR53 PRM6Q04705 352 aa-1.74□□□□□ -2.69
snR53snR53 YPL150WQ12152 901 aa-1.74□□□□□ -2.69
snR53snR53 BOL1Q3E793 110 aa-1.74□□□□□ -2.69
snR53snR53 YCL049CP25577 312 aa-1.75□□□□□ -2.69
snR53snR53 RCK1P38622 512 aa-1.75□□□□□ -2.69
snR53snR53 GRE3P38715 327 aaKnown RBP RIP-Chip data-1.75□□□□□ -2.69not detected
snR53snR53 LSM12P38828 187 aaKnown RBP-1.75□□□□□ -2.69
snR53snR53 HEM14P40012 539 aa-1.75□□□□□ -2.69
snR53snR53 YER135CP40082 130 aa-1.75□□□□□ -2.69
snR53snR53 PIB2P53191 635 aa-1.75□□□□□ -2.69
snR53snR53 KTR5P53966 522 aaPredicted RBP-1.75□□□□□ -2.69
snR53snR53 YDL114WQ07530 308 aa-1.75□□□□□ -2.69
snR53snR53 SGT2Q12118 346 aaKnown RBP-1.75□□□□□ -2.69
snR53snR53 TPT1Q12272 230 aaKnown RBP-1.75□□□□□ -2.69
snR53snR53 GYP6P32806 458 aa-1.76□□□□□ -2.69
snR53snR53 MED8P38304 223 aa-1.76□□□□□ -2.69
snR53snR53 SHC1P39000 512 aa-1.76□□□□□ -2.69
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms