RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W ATM1P40416 690 aa3.34□□□□□ -1.87
TRM112YNR046W OST1P41543 476 aaKnown RBP3.34□□□□□ -1.87
TRM112YNR046W IDP2P41939 412 aa3.34□□□□□ -1.87
TRM112YNR046W YNR068CP53754 272 aa3.34□□□□□ -1.87
TRM112YNR046W WSC2P53832 503 aa3.34□□□□□ -1.87
TRM112YNR046W BCH1Q05029 724 aa3.34□□□□□ -1.87
TRM112YNR046W ECM7Q06200 448 aa3.34□□□□□ -1.87
TRM112YNR046W NDE2Q07500 545 aa3.34□□□□□ -1.87
TRM112YNR046W HNT3Q08702 217 aa3.34□□□□□ -1.87
TRM112YNR046W NDD1Q08887 554 aa3.34□□□□□ -1.87
TRM112YNR046W THP3Q12049 470 aaKnown RBP3.34□□□□□ -1.87
TRM112YNR046W PSY3Q12318 242 aa3.34□□□□□ -1.87
TRM112YNR046W RNH203Q12338 110 aa3.34□□□□□ -1.87
TRM112YNR046W NCA2Q12374 616 aa3.34□□□□□ -1.87
TRM112YNR046W RPL12AP0CX53 165 aaKnown RBP3.33□□□□□ -1.88
TRM112YNR046W RPL12BP0CX54 165 aa3.33□□□□□ -1.88
TRM112YNR046W TAL1P15019 335 aaKnown RBP3.33□□□□□ -1.88
TRM112YNR046W RNA14P25298 677 aaKnown RBP3.33□□□□□ -1.88
TRM112YNR046W YCL068CP25593 260 aa3.33□□□□□ -1.88
TRM112YNR046W MUD1P32605 298 aaKnown RBP3.33□□□□□ -1.88
TRM112YNR046W SPP381P38282 291 aaPredicted RBP3.33□□□□□ -1.88
TRM112YNR046W SNM1P40993 198 aa3.33□□□□□ -1.88
TRM112YNR046W TOS3P43637 560 aa3.33□□□□□ -1.88
TRM112YNR046W STE24P47154 453 aa3.33□□□□□ -1.88
TRM112YNR046W YGL260WP53056 76 aa3.33□□□□□ -1.88
TRM112YNR046W MPS2P53159 387 aa3.33□□□□□ -1.88
TRM112YNR046W PRM1P53835 661 aa3.33□□□□□ -1.88
TRM112YNR046W YNL143CP53908 130 aa3.33□□□□□ -1.88
TRM112YNR046W ADA2Q02336 434 aa3.33□□□□□ -1.88
TRM112YNR046W CCE1Q03702 353 aa3.33□□□□□ -1.88
TRM112YNR046W SMA2Q04658 369 aa3.33□□□□□ -1.88
TRM112YNR046W RRN11Q04712 507 aa3.33□□□□□ -1.88
TRM112YNR046W OPI3P05375 206 aa3.32□□□□□ -1.88
TRM112YNR046W SCH9P11792 824 aaKnown RBP3.32□□□□□ -1.88
TRM112YNR046W AGA1P32323 725 aa3.32□□□□□ -1.88
TRM112YNR046W TOA1P32773 286 aa3.32□□□□□ -1.88
TRM112YNR046W SDH3P33421 198 aa3.32□□□□□ -1.88
TRM112YNR046W SKT5P34226 696 aa3.32□□□□□ -1.88
TRM112YNR046W CHK1P38147 527 aa3.32□□□□□ -1.88
TRM112YNR046W YGR117CP53270 476 aa3.32□□□□□ -1.88
TRM112YNR046W PDR16P53860 351 aaKnown RBP3.32□□□□□ -1.88
TRM112YNR046W HXT11P54862 567 aa3.32□□□□□ -1.88
TRM112YNR046W SPR6Q01684 191 aa3.32□□□□□ -1.88
TRM112YNR046W UTP6Q02354 440 aaKnown RBP3.32□□□□□ -1.88
TRM112YNR046W RRB1Q04225 511 aaKnown RBP3.32□□□□□ -1.88
TRM112YNR046W MGR3Q04472 501 aa3.32□□□□□ -1.88
TRM112YNR046W PML1Q07930 204 aaPredicted RBP3.32□□□□□ -1.88
TRM112YNR046W PEX27Q08580 376 aa3.32□□□□□ -1.88
TRM112YNR046W ESA1Q08649 445 aa3.32□□□□□ -1.88
TRM112YNR046W YBR298C-AQ8TGK4 73 aa3.32□□□□□ -1.88
TRM112YNR046W TPK3P05986 398 aa3.31□□□□□ -1.88
TRM112YNR046W THR4P16120 514 aaKnown RBP3.31□□□□□ -1.88
TRM112YNR046W PSO2P30620 661 aa3.31□□□□□ -1.88
TRM112YNR046W RPS0AP32905 252 aaKnown RBP3.31□□□□□ -1.88
TRM112YNR046W FMP46P36141 133 aaKnown RBP3.31□□□□□ -1.88
TRM112YNR046W NAS2P40555 220 aa3.31□□□□□ -1.88
TRM112YNR046W WWM1P43582 211 aaKnown RBP3.31□□□□□ -1.88
TRM112YNR046W EFM3P47163 339 aa3.31□□□□□ -1.88
TRM112YNR046W ALF1P53904 254 aa3.31□□□□□ -1.88
TRM112YNR046W LDS2Q08218 356 aa3.31□□□□□ -1.88
TRM112YNR046W RAX1Q08760 435 aa3.31□□□□□ -1.88
TRM112YNR046W POM152P39685 1337 aa3.3□□□□□ -1.88
TRM112YNR046W STE3P06783 470 aa3.3□□□□□ -1.88
TRM112YNR046W YEF1P32622 495 aa3.3□□□□□ -1.88
TRM112YNR046W MSG5P38590 489 aa3.3□□□□□ -1.88
TRM112YNR046W SNL1P40548 159 aa3.3□□□□□ -1.88
TRM112YNR046W NCA3P46955 337 aa3.3□□□□□ -1.88
TRM112YNR046W PMT5P52867 743 aa3.3□□□□□ -1.88
TRM112YNR046W HST1P53685 503 aa3.3□□□□□ -1.88
TRM112YNR046W NOP6Q07623 225 aaKnown RBP3.3□□□□□ -1.88
TRM112YNR046W REX3Q12090 404 aa3.3□□□□□ -1.88
TRM112YNR046W YOP1Q12402 180 aa3.3□□□□□ -1.88
TRM112YNR046W PAB1P04147 577 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
TRM112YNR046W CAP2P13517 287 aa3.29□□□□□ -1.88
TRM112YNR046W EXG1P23776 448 aaKnown RBP3.29□□□□□ -1.88
TRM112YNR046W CPR4P25334 318 aa3.29□□□□□ -1.88
TRM112YNR046W EFB1P32471 206 aaKnown RBP3.29□□□□□ -1.88
TRM112YNR046W YHR177WP38867 453 aa3.29□□□□□ -1.88
TRM112YNR046W COX14P39103 70 aa3.29□□□□□ -1.88
TRM112YNR046W JLP2P40206 208 aa3.29□□□□□ -1.88
TRM112YNR046W SIM1P40472 476 aa3.29□□□□□ -1.88
TRM112YNR046W SHE4P51534 789 aa3.29□□□□□ -1.88
TRM112YNR046W YMR310CQ04867 317 aaPredicted RBP3.29□□□□□ -1.88
TRM112YNR046W SPH1Q06160 661 aa3.29□□□□□ -1.88
TRM112YNR046W ASA1Q06822 443 aa3.29□□□□□ -1.88
TRM112YNR046W GLE1Q12315 538 aa3.29□□□□□ -1.88
TRM112YNR046W SFG1Q12507 346 aa3.29□□□□□ -1.88
TRM112YNR046W YCL021W-AQ96VH3 125 aa3.29□□□□□ -1.88
TRM112YNR046W MAS1P10507 462 aa3.28□□□□□ -1.88
TRM112YNR046W RNA1P11745 407 aaKnown RBP3.28□□□□□ -1.88
TRM112YNR046W MRPL8P22353 238 aa3.28□□□□□ -1.88
TRM112YNR046W MSK1P32048 576 aa3.28□□□□□ -1.88
TRM112YNR046W HMX1P32339 317 aa3.28□□□□□ -1.88
TRM112YNR046W SRB2P34162 210 aa3.28□□□□□ -1.88
TRM112YNR046W YKL097CP34245 136 aa3.28□□□□□ -1.88
TRM112YNR046W MCR1P36060 302 aaKnown RBP3.28□□□□□ -1.88
TRM112YNR046W YBR137WP38276 179 aa3.28□□□□□ -1.88
TRM112YNR046W TIF5P38431 405 aaKnown RBP3.28□□□□□ -1.88
TRM112YNR046W YIL029CP40538 142 aa3.28□□□□□ -1.88
TRM112YNR046W RRP46P53256 223 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms