RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W EXG1P23776 448 aaKnown RBP2.87□□□□□ -1.95
VPS38YLR360W PHA2P32452 334 aa2.87□□□□□ -1.95
VPS38YLR360W GAT2P40209 560 aa2.87□□□□□ -1.95
VPS38YLR360W VHS2P40463 436 aa2.87□□□□□ -1.95
VPS38YLR360W YFR057WP43625 151 aa2.87□□□□□ -1.95
VPS38YLR360W BIR1P47134 954 aa2.87□□□□□ -1.95
VPS38YLR360W PIB2P53191 635 aa2.87□□□□□ -1.95
VPS38YLR360W AIM32Q04689 311 aa2.87□□□□□ -1.95
VPS38YLR360W RIF2Q06208 395 aa2.87□□□□□ -1.95
VPS38YLR360W DST1P07273 309 aa2.86□□□□□ -1.95
VPS38YLR360W CAP2P13517 287 aa2.86□□□□□ -1.95
VPS38YLR360W RIM1P32445 135 aaKnown RBP2.86□□□□□ -1.95
VPS38YLR360W NIP1P32497 812 aaKnown RBP2.86□□□□□ -1.95
VPS38YLR360W YKL097CP34245 136 aa2.86□□□□□ -1.95
VPS38YLR360W ZTA1P38230 334 aaKnown RBP2.86□□□□□ -1.95
VPS38YLR360W RTC2P38279 296 aa2.86□□□□□ -1.95
VPS38YLR360W SIM1P40472 476 aa2.86□□□□□ -1.95
VPS38YLR360W DFG10P40526 253 aa2.86□□□□□ -1.95
VPS38YLR360W YPS6P40583 537 aa2.86□□□□□ -1.95
VPS38YLR360W HAC1P41546 238 aa2.86□□□□□ -1.95
VPS38YLR360W TOS3P43637 560 aa2.86□□□□□ -1.95
VPS38YLR360W LCB3P47013 409 aa2.86□□□□□ -1.95
VPS38YLR360W AIM24P47127 394 aa2.86□□□□□ -1.95
VPS38YLR360W ALF1P53904 254 aa2.86□□□□□ -1.95
VPS38YLR360W PRP42Q03776 544 aaKnown RBP2.86□□□□□ -1.95
VPS38YLR360W RPN9Q04062 393 aaKnown RBP2.86□□□□□ -1.95
VPS38YLR360W TSA2Q04120 196 aa2.86□□□□□ -1.95
VPS38YLR360W LIP2Q06005 328 aa2.86□□□□□ -1.95
VPS38YLR360W YLR345WQ06137 509 aa2.86□□□□□ -1.95
VPS38YLR360W SMF3Q12078 473 aaPredicted RBP2.86□□□□□ -1.95
VPS38YLR360W YGK3Q12222 375 aaPredicted RBP2.86□□□□□ -1.95
VPS38YLR360W CDC21P06785 304 aa2.85□□□□□ -1.95
VPS38YLR360W HSP26P15992 214 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
VPS38YLR360W MAM33P40513 266 aa2.85□□□□□ -1.95
VPS38YLR360W YGR111WP53265 400 aa2.85□□□□□ -1.95
VPS38YLR360W YMR102CQ03177 834 aa2.85□□□□□ -1.95
VPS38YLR360W RTN1Q04947 295 aaKnown RBP2.85□□□□□ -1.95
VPS38YLR360W MDM36Q06820 579 aa2.85□□□□□ -1.95
VPS38YLR360W EAF3Q12432 401 aa2.85□□□□□ -1.95
VPS38YLR360W ATP1P07251 545 aaKnown RBP2.84□□□□□ -1.96
VPS38YLR360W AAT2P23542 418 aaKnown RBP2.84□□□□□ -1.96
VPS38YLR360W PRR1P28708 518 aa2.84□□□□□ -1.96
VPS38YLR360W DPH5P32469 300 aaPredicted RBP2.84□□□□□ -1.96
VPS38YLR360W OLA1P38219 394 aaKnown RBP2.84□□□□□ -1.96
VPS38YLR360W FAD1P38913 306 aa2.84□□□□□ -1.96
VPS38YLR360W OXA1P39952 402 aa2.84□□□□□ -1.96
VPS38YLR360W MMF1P40185 145 aaKnown RBP2.84□□□□□ -1.96
VPS38YLR360W TOM22P49334 152 aa2.84□□□□□ -1.96
VPS38YLR360W RRP46P53256 223 aaPredicted RBP2.84□□□□□ -1.96
VPS38YLR360W CRH1P53301 507 aa2.84□□□□□ -1.96
VPS38YLR360W SMC5Q08204 1093 aa2.84□□□□□ -1.96
VPS38YLR360W CEX1Q12453 761 aa2.84□□□□□ -1.96
VPS38YLR360W MDH1P17505 334 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
VPS38YLR360W RPB5P20434 215 aa2.83□□□□□ -1.96
VPS38YLR360W SKN1P33336 771 aa2.83□□□□□ -1.96
VPS38YLR360W SPT10P35208 640 aa2.83□□□□□ -1.96
VPS38YLR360W MRP21P38175 177 aa2.83□□□□□ -1.96
VPS38YLR360W STN1P38960 494 aa2.83□□□□□ -1.96
VPS38YLR360W CHS6P40955 746 aa2.83□□□□□ -1.96
VPS38YLR360W MST27P53176 234 aa2.83□□□□□ -1.96
VPS38YLR360W SPR6Q01684 191 aa2.83□□□□□ -1.96
VPS38YLR360W DCI1Q08558 271 aa2.83□□□□□ -1.96
VPS38YLR360W PIS1P06197 220 aaKnown RBP2.82□□□□□ -1.96
VPS38YLR360W HSP104P31539 908 aaKnown RBP2.82□□□□□ -1.96
VPS38YLR360W IES6P32617 166 aa2.82□□□□□ -1.96
VPS38YLR360W COX13P32799 129 aa2.82□□□□□ -1.96
VPS38YLR360W STP2P38704 541 aa2.82□□□□□ -1.96
VPS38YLR360W INM1P38710 295 aa2.82□□□□□ -1.96
VPS38YLR360W YHK8P38776 514 aa2.82□□□□□ -1.96
VPS38YLR360W EGT2P42835 1041 aa2.82□□□□□ -1.96
VPS38YLR360W TDA1Q03533 586 aa2.82□□□□□ -1.96
VPS38YLR360W YLR456WQ06199 204 aa2.82□□□□□ -1.96
VPS38YLR360W LOT6Q07923 191 aa2.82□□□□□ -1.96
VPS38YLR360W RUP1Q12242 671 aa2.82□□□□□ -1.96
VPS38YLR360W SMC6Q12749 1114 aa2.82□□□□□ -1.96
VPS38YLR360W POM152P39685 1337 aa2.81□□□□□ -1.96
VPS38YLR360W PDE2P06776 526 aa2.81□□□□□ -1.96
VPS38YLR360W BAT1P38891 393 aaKnown RBP2.81□□□□□ -1.96
VPS38YLR360W BNS1P50084 137 aa2.81□□□□□ -1.96
VPS38YLR360W GPM3Q12326 303 aa2.81□□□□□ -1.96
VPS38YLR360W ALG1P16661 449 aa2.8□□□□□ -1.96
VPS38YLR360W MID2P36027 376 aa2.8□□□□□ -1.96
VPS38YLR360W YNL208WP40159 199 aaKnown RBP2.8□□□□□ -1.96
VPS38YLR360W YET2Q04210 160 aa2.8□□□□□ -1.96
VPS38YLR360W CMS1Q07897 291 aaKnown RBP2.8□□□□□ -1.96
VPS38YLR360W UAF30Q08747 228 aa2.8□□□□□ -1.96
VPS38YLR360W HTZ1Q12692 134 aaKnown RBP2.8□□□□□ -1.96
VPS38YLR360W SLM5P25345 492 aaKnown RBP2.79□□□□□ -1.96
VPS38YLR360W YEF1P32622 495 aa2.79□□□□□ -1.96
VPS38YLR360W MPE1P35728 441 aaKnown RBP2.79□□□□□ -1.96
VPS38YLR360W SRP72P38688 640 aaKnown RBP2.79□□□□□ -1.96
VPS38YLR360W GPI16P38875 610 aa2.79□□□□□ -1.96
VPS38YLR360W ATG18P43601 500 aa2.79□□□□□ -1.96
VPS38YLR360W ROG1P53118 685 aa2.79□□□□□ -1.96
VPS38YLR360W YGR117CP53270 476 aa2.79□□□□□ -1.96
VPS38YLR360W COS1P53822 381 aa2.79□□□□□ -1.96
VPS38YLR360W GYL1Q04322 720 aa2.79□□□□□ -1.96
VPS38YLR360W PRM6Q04705 352 aa2.79□□□□□ -1.96
VPS38YLR360W YCR024C-BQ3E7Z8 88 aa2.79□□□□□ -1.96
VPS38YLR360W NAG1Q8TGN9 163 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms