RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	BCH1	Q05029	724 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	HNT3	Q08702	217 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	ATP1	P07251	545 aa	Known RBP	5	□□□□□ -1.61
RSA3	YLR221C	RPL12A	P0CX53	165 aa	Known RBP	5	□□□□□ -1.61
RSA3	YLR221C	RPL12B	P0CX54	165 aa		5	□□□□□ -1.61
RSA3	YLR221C	AGA1	P32323	725 aa		5	□□□□□ -1.61
RSA3	YLR221C	DOA1	P36037	715 aa		5	□□□□□ -1.61
RSA3	YLR221C	RPA34	P47006	233 aa	Predicted RBP	5	□□□□□ -1.61
RSA3	YLR221C	YGL260W	P53056	76 aa		5	□□□□□ -1.61
RSA3	YLR221C	ECM7	Q06200	448 aa		5	□□□□□ -1.61
RSA3	YLR221C	YLR108C	Q12259	485 aa		5	□□□□□ -1.61
RSA3	YLR221C	NCA2	Q12374	616 aa		5	□□□□□ -1.61
RSA3	YLR221C	ARF1	P11076	181 aa	Known RBP	4.99	□□□□□ -1.61
RSA3	YLR221C	RDS1	P25611	832 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	MUD1	P32605	298 aa	Known RBP	4.99	□□□□□ -1.61
RSA3	YLR221C	SPT10	P35208	640 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	FMP46	P36141	133 aa	Known RBP	4.99	□□□□□ -1.61
RSA3	YLR221C	SPP381	P38282	291 aa	Predicted RBP	4.99	□□□□□ -1.61
RSA3	YLR221C	POP2	P39008	433 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	TOS3	P43637	560 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	CUE3	P53137	624 aa	Known RBP	4.99	□□□□□ -1.61
RSA3	YLR221C	YNR068C	P53754	272 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	YNL143C	P53908	130 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	AQR1	P53943	586 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	NDE2	Q07500	545 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	PSY3	Q12318	242 aa		4.99	□□□□□ -1.61
RSA3	YLR221C	SCH9	P11792	824 aa	Known RBP	4.98	□□□□□ -1.61
RSA3	YLR221C	YCL068C	P25593	260 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	SKT5	P34226	696 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	ATM1	P40416	690 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	YIL089W	P40500	205 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	STE24	P47154	453 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	PDR16	P53860	351 aa	Known RBP	4.98	□□□□□ -1.61
RSA3	YLR221C	HXT11	P54862	567 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	RRN11	Q04712	507 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	ESA1	Q08649	445 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	RAX1	Q08760	435 aa		4.98	□□□□□ -1.61
RSA3	YLR221C	STF1	P01098	86 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	OPI3	P05375	206 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	TAL1	P15019	335 aa	Known RBP	4.97	□□□□□ -1.61
RSA3	YLR221C	CHK1	P38147	527 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	SIM1	P40472	476 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	UTP6	Q02354	440 aa	Known RBP	4.97	□□□□□ -1.61
RSA3	YLR221C	SMA2	Q04658	369 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	NOP6	Q07623	225 aa	Known RBP	4.97	□□□□□ -1.61
RSA3	YLR221C	YCL021W-A	Q96VH3	125 aa		4.97	□□□□□ -1.61
RSA3	YLR221C	PSO2	P30620	661 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	TIF5	P38431	405 aa	Known RBP	4.96	□□□□□ -1.62
RSA3	YLR221C	JLP2	P40206	208 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	PMT5	P52867	743 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	MPS2	P53159	387 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	YGR117C	P53270	476 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	PRM1	P53835	661 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	CCE1	Q03702	353 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	RRB1	Q04225	511 aa	Known RBP	4.96	□□□□□ -1.62
RSA3	YLR221C	PML1	Q07930	204 aa	Predicted RBP	4.96	□□□□□ -1.62
RSA3	YLR221C	PEX27	Q08580	376 aa		4.96	□□□□□ -1.62
RSA3	YLR221C	TPK3	P05986	398 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	YBR137W	P38276	179 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	NAS2	P40555	220 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	WWM1	P43582	211 aa	Known RBP	4.95	□□□□□ -1.62
RSA3	YLR221C	NCA3	P46955	337 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	SPR6	Q01684	191 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	ADA2	Q02336	434 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	LDS2	Q08218	356 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	POM152	P39685	1337 aa		4.95	□□□□□ -1.62
RSA3	YLR221C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
RSA3	YLR221C	CPR4	P25334	318 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	YEF1	P32622	495 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	SDH3	P33421	198 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	YKL097C	P34245	136 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	MSG5	P38590	489 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	YHR177W	P38867	453 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	EFM3	P47163	339 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	RRP46	P53256	223 aa	Predicted RBP	4.94	□□□□□ -1.62
RSA3	YLR221C	MGR3	Q04472	501 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	ASA1	Q06822	443 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	SFG1	Q12507	346 aa		4.94	□□□□□ -1.62
RSA3	YLR221C	COX14	P39103	70 aa		4.93	□□□□□ -1.62
RSA3	YLR221C	PRM5	P40476	318 aa		4.93	□□□□□ -1.62
RSA3	YLR221C	HER2	Q03557	464 aa		4.93	□□□□□ -1.62
RSA3	YLR221C	YOP1	Q12402	180 aa		4.93	□□□□□ -1.62
RSA3	YLR221C	STE3	P06783	470 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	RNA1	P11745	407 aa	Known RBP	4.92	□□□□□ -1.62
RSA3	YLR221C	CAP2	P13517	287 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	THR4	P16120	514 aa	Known RBP	4.92	□□□□□ -1.62
RSA3	YLR221C	EXG1	P23776	448 aa	Known RBP	4.92	□□□□□ -1.62
RSA3	YLR221C	YIL067C	P40514	678 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	SHE4	P51534	789 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	REX3	Q12090	404 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	YER078W-A	Q3E7A2	54 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	YMR230W-A	Q3E7B5	62 aa		4.92	□□□□□ -1.62
RSA3	YLR221C	HHF1	P02309	103 aa	Known RBP	4.91	□□□□□ -1.62
RSA3	YLR221C	MSK1	P32048	576 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	YIL029C	P40538	142 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	SNL1	P40548	159 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	MDE1	P47095	244 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	ALF1	P53904	254 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	MDM36	Q06820	579 aa		4.91	□□□□□ -1.62
RSA3	YLR221C	TSR1	Q07381	788 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms