RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SFI1Q12369 946 aa3.19□□□□□ -1.9
SEC28YIL076W COX3P00420 269 aa3.18□□□□□ -1.9
SEC28YIL076W CDC31P06704 161 aaKnown RBP3.18□□□□□ -1.9
SEC28YIL076W CAP2P13517 287 aa3.18□□□□□ -1.9
SEC28YIL076W YCR051WP25631 222 aa3.18□□□□□ -1.9
SEC28YIL076W CDC50P25656 391 aa3.18□□□□□ -1.9
SEC28YIL076W NFU1P32860 256 aa3.18□□□□□ -1.9
SEC28YIL076W ATP3P38077 311 aaKnown RBP3.18□□□□□ -1.9
SEC28YIL076W OM14P38325 134 aa3.18□□□□□ -1.9
SEC28YIL076W YHK8P38776 514 aa3.18□□□□□ -1.9
SEC28YIL076W TIM17P39515 158 aa3.18□□□□□ -1.9
SEC28YIL076W TDA1Q03533 586 aa3.18□□□□□ -1.9
SEC28YIL076W ACL4Q03771 387 aa3.18□□□□□ -1.9
SEC28YIL076W MFG1Q07684 458 aa3.18□□□□□ -1.9
SEC28YIL076W SMC5Q08204 1093 aa3.18□□□□□ -1.9
SEC28YIL076W NCA2Q12374 616 aa3.18□□□□□ -1.9
SEC28YIL076W EAF3Q12432 401 aa3.18□□□□□ -1.9
SEC28YIL076W AFI1Q99222 893 aa3.18□□□□□ -1.9
SEC28YIL076W RPN12P32496 274 aa3.17□□□□□ -1.9
SEC28YIL076W YKL097CP34245 136 aa3.17□□□□□ -1.9
SEC28YIL076W MAM33P40513 266 aa3.17□□□□□ -1.9
SEC28YIL076W PGU1P47180 361 aa3.17□□□□□ -1.9
SEC28YIL076W YMR102CQ03177 834 aa3.17□□□□□ -1.9
SEC28YIL076W ANR2P36090 516 aaPredicted RBP3.16□□□□□ -1.9
SEC28YIL076W LSM5P40089 93 aaKnown RBP3.16□□□□□ -1.9
SEC28YIL076W TOS3P43637 560 aa3.16□□□□□ -1.9
SEC28YIL076W YGR018CP53211 109 aa3.16□□□□□ -1.9
SEC28YIL076W YGR250CP53316 781 aaKnown RBP3.16□□□□□ -1.9
SEC28YIL076W BNI5P53890 448 aaKnown RBP3.16□□□□□ -1.9
SEC28YIL076W MMT1Q03218 510 aa3.16□□□□□ -1.9
SEC28YIL076W IES4Q08561 116 aa3.16□□□□□ -1.9
SEC28YIL076W NAG1Q8TGN9 163 aa3.16□□□□□ -1.9
SEC28YIL076W INH1P01097 85 aa3.15□□□□□ -1.91
SEC28YIL076W ALD5P40047 520 aaKnown RBP3.15□□□□□ -1.91
SEC28YIL076W YPS6P40583 537 aa3.15□□□□□ -1.91
SEC28YIL076W YPS5P53057 165 aa3.15□□□□□ -1.91
SEC28YIL076W COS1P53822 381 aa3.15□□□□□ -1.91
SEC28YIL076W MMR1Q06324 491 aa3.15□□□□□ -1.91
SEC28YIL076W SCM3Q12334 223 aa3.15□□□□□ -1.91
SEC28YIL076W ADH1P00330 348 aaKnown RBP3.14□□□□□ -1.91
SEC28YIL076W HEL1P36113 551 aa3.14□□□□□ -1.91
SEC28YIL076W NOC2P39744 710 aaKnown RBP3.14□□□□□ -1.91
SEC28YIL076W CHS6P40955 746 aa3.14□□□□□ -1.91
SEC28YIL076W ALF1P53904 254 aa3.14□□□□□ -1.91
SEC28YIL076W MDM1Q01846 1127 aa3.14□□□□□ -1.91
SEC28YIL076W LOT6Q07923 191 aa3.14□□□□□ -1.91
SEC28YIL076W CEX1Q12453 761 aa3.14□□□□□ -1.91
SEC28YIL076W PIS1P06197 220 aaKnown RBP3.13□□□□□ -1.91
SEC28YIL076W CBP6P07253 162 aaPredicted RBP3.13□□□□□ -1.91
SEC28YIL076W PRB1P09232 635 aa3.13□□□□□ -1.91
SEC28YIL076W GAT2P40209 560 aa3.13□□□□□ -1.91
SEC28YIL076W RRP46P53256 223 aaPredicted RBP3.13□□□□□ -1.91
SEC28YIL076W CLD1P53264 445 aa3.13□□□□□ -1.91
SEC28YIL076W MED2Q12124 431 aa3.13□□□□□ -1.91
SEC28YIL076W RRG1Q12167 365 aaPredicted RBP3.13□□□□□ -1.91
SEC28YIL076W MTR10Q99189 972 aa3.13□□□□□ -1.91
SEC28YIL076W FUR1P18562 216 aaKnown RBP3.12□□□□□ -1.91
SEC28YIL076W CYS4P32582 507 aaKnown RBP3.12□□□□□ -1.91
SEC28YIL076W GPI18P38211 433 aa3.12□□□□□ -1.91
SEC28YIL076W SLM4P38247 162 aa3.12□□□□□ -1.91
SEC28YIL076W YNL208WP40159 199 aaKnown RBP3.12□□□□□ -1.91
SEC28YIL076W YGL262WP53054 175 aa3.12□□□□□ -1.91
SEC28YIL076W SKI8Q02793 397 aaPredicted RBP3.12□□□□□ -1.91
SEC28YIL076W AIM32Q04689 311 aa3.12□□□□□ -1.91
SEC28YIL076W YCR024C-BQ3E7Z8 88 aa3.12□□□□□ -1.91
SEC28YIL076W DNA2P38859 1522 aa3.12□□□□□ -1.91
SEC28YIL076W URA7P28274 579 aaKnown RBP3.11□□□□□ -1.91
SEC28YIL076W BYE1P36106 594 aa3.11□□□□□ -1.91
SEC28YIL076W TOM22P49334 152 aa3.11□□□□□ -1.91
SEC28YIL076W FLC3P53121 802 aa3.11□□□□□ -1.91
SEC28YIL076W RPT4P53549 437 aaKnown RBP3.11□□□□□ -1.91
SEC28YIL076W HOT1Q03213 719 aa3.11□□□□□ -1.91
SEC28YIL076W RPN9Q04062 393 aaKnown RBP3.11□□□□□ -1.91
SEC28YIL076W PRM6Q04705 352 aa3.11□□□□□ -1.91
SEC28YIL076W DST1P07273 309 aa3.1□□□□□ -1.91
SEC28YIL076W ARO3P14843 370 aaKnown RBP3.1□□□□□ -1.91
SEC28YIL076W ZRC1P20107 442 aa3.1□□□□□ -1.91
SEC28YIL076W PFS1P38872 237 aa3.1□□□□□ -1.91
SEC28YIL076W YER079WP40052 210 aaKnown RBP3.1□□□□□ -1.91
SEC28YIL076W CAK1P43568 368 aaPredicted RBP3.1□□□□□ -1.91
SEC28YIL076W TPS1Q00764 495 aaKnown RBP3.1□□□□□ -1.91
SEC28YIL076W POM152P39685 1337 aa3.1□□□□□ -1.91
SEC28YIL076W ATP1P07251 545 aaKnown RBP3.09□□□□□ -1.91
SEC28YIL076W ADK2P26364 225 aa3.09□□□□□ -1.91
SEC28YIL076W ERV1P27882 189 aa3.09□□□□□ -1.91
SEC28YIL076W YEF1P32622 495 aa3.09□□□□□ -1.91
SEC28YIL076W ASC1P38011 319 aaKnown RBP3.09□□□□□ -1.91
SEC28YIL076W STP2P38704 541 aa3.09□□□□□ -1.91
SEC28YIL076W VHS2P40463 436 aa3.09□□□□□ -1.91
SEC28YIL076W IGD1P43598 195 aa3.09□□□□□ -1.91
SEC28YIL076W YPR091CQ06833 770 aa3.09□□□□□ -1.91
SEC28YIL076W VPS54Q12071 889 aa3.09□□□□□ -1.91
SEC28YIL076W FOL3Q12676 427 aaPredicted RBP3.09□□□□□ -1.91
SEC28YIL076W SWR1Q05471 1514 aa3.09□□□□□ -1.92
SEC28YIL076W SSC1P0CS90 654 aaKnown RBP3.08□□□□□ -1.92
SEC28YIL076W DPH2P32461 534 aa3.08□□□□□ -1.92
SEC28YIL076W MRPL27P36526 146 aaPredicted RBP3.08□□□□□ -1.92
SEC28YIL076W MMF1P40185 145 aaKnown RBP3.08□□□□□ -1.92
SEC28YIL076W SRB7P47822 140 aa3.08□□□□□ -1.92
SEC28YIL076W YIP5P53108 310 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 129.9 ms