RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W COX14P39103 70 aa2.77□□□□□ -1.97
LOC1YFR001W CHS6P40955 746 aa2.77□□□□□ -1.97
LOC1YFR001W TOS3P43637 560 aa2.77□□□□□ -1.97
LOC1YFR001W MRM2P53123 320 aa2.77□□□□□ -1.97
LOC1YFR001W AHC1Q12433 566 aa2.77□□□□□ -1.97
LOC1YFR001W IZH2Q12442 317 aa2.77□□□□□ -1.97
LOC1YFR001W SMC6Q12749 1114 aa2.77□□□□□ -1.97
LOC1YFR001W NAM2P11325 894 aa2.76□□□□□ -1.97
LOC1YFR001W CAP2P13517 287 aa2.76□□□□□ -1.97
LOC1YFR001W MSI1P13712 422 aa2.76□□□□□ -1.97
LOC1YFR001W NUP2P32499 720 aa2.76□□□□□ -1.97
LOC1YFR001W VMA8P32610 256 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W PRS1P32895 427 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W YKL097CP34245 136 aa2.76□□□□□ -1.97
LOC1YFR001W SRP72P38688 640 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W STP2P38704 541 aa2.76□□□□□ -1.97
LOC1YFR001W AIM10P39965 576 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W YER079WP40052 210 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W GAB1P41733 394 aa2.76□□□□□ -1.97
LOC1YFR001W ADA2Q02336 434 aa2.76□□□□□ -1.97
LOC1YFR001W MDM36Q06820 579 aa2.76□□□□□ -1.97
LOC1YFR001W CUE5Q08412 411 aaKnown RBP2.76□□□□□ -1.97
LOC1YFR001W YGK3Q12222 375 aaPredicted RBP2.76□□□□□ -1.97
LOC1YFR001W NCA2Q12374 616 aa2.76□□□□□ -1.97
LOC1YFR001W SOD1P00445 154 aaKnown RBP2.75□□□□□ -1.97
LOC1YFR001W DST1P07273 309 aa2.75□□□□□ -1.97
LOC1YFR001W HSP104P31539 908 aaKnown RBP2.75□□□□□ -1.97
LOC1YFR001W FAD1P38913 306 aa2.75□□□□□ -1.97
LOC1YFR001W UTP18P40362 594 aaPredicted RBP2.75□□□□□ -1.97
LOC1YFR001W YML6P51998 286 aa2.75□□□□□ -1.97
LOC1YFR001W PIB2P53191 635 aa2.75□□□□□ -1.97
LOC1YFR001W COS1P53822 381 aa2.75□□□□□ -1.97
LOC1YFR001W TSA2Q04120 196 aa2.75□□□□□ -1.97
LOC1YFR001W YDR341CQ05506 607 aaKnown RBP2.75□□□□□ -1.97
LOC1YFR001W DCI1Q08558 271 aa2.75□□□□□ -1.97
LOC1YFR001W GPM3Q12326 303 aa2.75□□□□□ -1.97
LOC1YFR001W CDC21P06785 304 aa2.74□□□□□ -1.97
LOC1YFR001W ALG1P16661 449 aa2.74□□□□□ -1.97
LOC1YFR001W PCL1P24867 279 aa2.74□□□□□ -1.97
LOC1YFR001W DPH5P32469 300 aaPredicted RBP2.74□□□□□ -1.97
LOC1YFR001W SKN1P33336 771 aa2.74□□□□□ -1.97
LOC1YFR001W LTV1P34078 463 aa2.74□□□□□ -1.97
LOC1YFR001W UTH1P36135 365 aa2.74□□□□□ -1.97
LOC1YFR001W INM1P38710 295 aa2.74□□□□□ -1.97
LOC1YFR001W GPI16P38875 610 aa2.74□□□□□ -1.97
LOC1YFR001W MIG3P39943 394 aa2.74□□□□□ -1.97
LOC1YFR001W BUD27P43573 796 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
LOC1YFR001W HAL1Q01766 294 aa2.74□□□□□ -1.97
LOC1YFR001W RIF2Q06208 395 aa2.74□□□□□ -1.97
LOC1YFR001W JID1Q12350 301 aa2.74□□□□□ -1.97
LOC1YFR001W CEX1Q12453 761 aa2.74□□□□□ -1.97
LOC1YFR001W ATP1P07251 545 aaKnown RBP2.73□□□□□ -1.97
LOC1YFR001W RPB5P20434 215 aa2.73□□□□□ -1.97
LOC1YFR001W YHK8P38776 514 aa2.73□□□□□ -1.97
LOC1YFR001W MMF1P40185 145 aaKnown RBP2.73□□□□□ -1.97
LOC1YFR001W YFR057WP43625 151 aa2.73□□□□□ -1.97
LOC1YFR001W AIM24P47127 394 aa2.73□□□□□ -1.97
LOC1YFR001W MST27P53176 234 aa2.73□□□□□ -1.97
LOC1YFR001W CIK1Q01649 594 aa2.73□□□□□ -1.97
LOC1YFR001W YMR102CQ03177 834 aa2.73□□□□□ -1.97
LOC1YFR001W NSE1Q07913 336 aa2.73□□□□□ -1.97
LOC1YFR001W SMC5Q08204 1093 aa2.73□□□□□ -1.97
LOC1YFR001W SMF3Q12078 473 aaPredicted RBP2.73□□□□□ -1.97
LOC1YFR001W NAT1P12945 854 aaKnown RBP2.72□□□□□ -1.97
LOC1YFR001W HSP26P15992 214 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
LOC1YFR001W YEF1P32622 495 aa2.72□□□□□ -1.97
LOC1YFR001W RTC2P38279 296 aa2.72□□□□□ -1.97
LOC1YFR001W LCB3P47013 409 aa2.72□□□□□ -1.97
LOC1YFR001W BIR1P47134 954 aa2.72□□□□□ -1.97
LOC1YFR001W TDA1Q03533 586 aa2.72□□□□□ -1.97
LOC1YFR001W RTN1Q04947 295 aaKnown RBP2.72□□□□□ -1.97
LOC1YFR001W EAF3Q12432 401 aa2.72□□□□□ -1.97
LOC1YFR001W POM152P39685 1337 aa2.71□□□□□ -1.98
LOC1YFR001W SSC1P0CS90 654 aaKnown RBP2.71□□□□□ -1.98
LOC1YFR001W PRR1P28708 518 aa2.71□□□□□ -1.98
LOC1YFR001W PXA2P34230 853 aa2.71□□□□□ -1.98
LOC1YFR001W MAM33P40513 266 aa2.71□□□□□ -1.98
LOC1YFR001W HAC1P41546 238 aa2.71□□□□□ -1.98
LOC1YFR001W STE24P47154 453 aa2.71□□□□□ -1.98
LOC1YFR001W BNS1P50084 137 aa2.71□□□□□ -1.98
LOC1YFR001W YGR117CP53270 476 aa2.71□□□□□ -1.98
LOC1YFR001W CRH1P53301 507 aa2.71□□□□□ -1.98
LOC1YFR001W SPR6Q01684 191 aa2.71□□□□□ -1.98
LOC1YFR001W GYL1Q04322 720 aa2.71□□□□□ -1.98
LOC1YFR001W CMS1Q07897 291 aaKnown RBP2.71□□□□□ -1.98
LOC1YFR001W LOT6Q07923 191 aa2.71□□□□□ -1.98
LOC1YFR001W SPE3Q12074 293 aaKnown RBP2.71□□□□□ -1.98
LOC1YFR001W RNH203Q12338 110 aa2.71□□□□□ -1.98
LOC1YFR001W PAB1P04147 577 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
LOC1YFR001W PIS1P06197 220 aaKnown RBP2.7□□□□□ -1.98
LOC1YFR001W PDE2P06776 526 aa2.7□□□□□ -1.98
LOC1YFR001W AAT2P23542 418 aaKnown RBP2.7□□□□□ -1.98
LOC1YFR001W PHO91P27514 894 aa2.7□□□□□ -1.98
LOC1YFR001W NRP1P32770 719 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
LOC1YFR001W COX13P32799 129 aa2.7□□□□□ -1.98
LOC1YFR001W ANR2P36090 516 aaPredicted RBP2.7□□□□□ -1.98
LOC1YFR001W QDR3P38227 689 aa2.7□□□□□ -1.98
LOC1YFR001W BAT1P38891 393 aaKnown RBP2.7□□□□□ -1.98
LOC1YFR001W PTI1P39927 425 aaPredicted RBP2.7□□□□□ -1.98
LOC1YFR001W OXA1P39952 402 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms