RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	TIM18	Q08749	192 aa		1.86	□□□□□ -2.11
DOT6	YER088C	VAM3	Q12241	283 aa		1.86	□□□□□ -2.11
DOT6	YER088C	HIS4	P00815	799 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	SCEI	P03882	235 aa		1.86	□□□□□ -2.11
DOT6	YER088C	ISY1	P21374	235 aa	Predicted RBP	1.86	□□□□□ -2.11
DOT6	YER088C	RPI1	P23250	407 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	RHB1	P25378	209 aa		1.86	□□□□□ -2.11
DOT6	YER088C	YCR051W	P25631	222 aa		1.86	□□□□□ -2.11
DOT6	YER088C	APE2	P32454	952 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	REC114	P32841	428 aa		1.86	□□□□□ -2.11
DOT6	YER088C	ARA1	P38115	344 aa		1.86	□□□□□ -2.11
DOT6	YER088C	YHR054C	P38780	354 aa		1.86	□□□□□ -2.11
DOT6	YER088C	RPS0B	P46654	252 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	YIF1	P53845	314 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	KAP120	Q02932	1032 aa		1.86	□□□□□ -2.11
DOT6	YER088C	RRP45	Q05636	305 aa	Known RBP	1.86	□□□□□ -2.11
DOT6	YER088C	PBA1	Q05778	276 aa		1.86	□□□□□ -2.11
DOT6	YER088C	YPL199C	Q08954	240 aa		1.86	□□□□□ -2.11
DOT6	YER088C	SEN1	Q00416	2231 aa	Known RBP	1.85	□□□□□ -2.11
DOT6	YER088C	COX3	P00420	269 aa		1.85	□□□□□ -2.11
DOT6	YER088C	BEM1	P29366	551 aa		1.85	□□□□□ -2.11
DOT6	YER088C	SOR1	P35497	357 aa	Known RBP	1.85	□□□□□ -2.11
DOT6	YER088C	SWH1	P35845	1188 aa		1.85	□□□□□ -2.11
DOT6	YER088C	JNM1	P36224	373 aa		1.85	□□□□□ -2.11
DOT6	YER088C	MPP10	P47083	593 aa	Known RBP	1.85	□□□□□ -2.11
DOT6	YER088C	RRP46	P53256	223 aa	Predicted RBP	1.85	□□□□□ -2.11
DOT6	YER088C	MTM1	P53320	366 aa		1.85	□□□□□ -2.11
DOT6	YER088C	TOF1	P53840	1238 aa		1.85	□□□□□ -2.11
DOT6	YER088C	GPI15	P53961	229 aa		1.85	□□□□□ -2.11
DOT6	YER088C	YMR181C	Q03231	154 aa		1.85	□□□□□ -2.11
DOT6	YER088C	RRN11	Q04712	507 aa		1.85	□□□□□ -2.11
DOT6	YER088C	SNT309	Q06091	175 aa	Predicted RBP	1.85	□□□□□ -2.11
DOT6	YER088C	TSR1	Q07381	788 aa	Known RBP	1.85	□□□□□ -2.11
DOT6	YER088C	SOR2	Q07786	357 aa		1.85	□□□□□ -2.11
DOT6	YER088C	SKI7	Q08491	747 aa	Predicted RBP	1.85	□□□□□ -2.11
DOT6	YER088C	PDX1	P16451	410 aa		1.84	□□□□□ -2.11
DOT6	YER088C	FUR1	P18562	216 aa	Known RBP	1.84	□□□□□ -2.11
DOT6	YER088C	RAD57	P25301	460 aa		1.84	□□□□□ -2.11
DOT6	YER088C	LSB5	P25369	354 aa		1.84	□□□□□ -2.11
DOT6	YER088C	SPS22	P25380	463 aa		1.84	□□□□□ -2.11
DOT6	YER088C	YBL059W	P34224	193 aa		1.84	□□□□□ -2.11
DOT6	YER088C	STB6	P36085	766 aa		1.84	□□□□□ -2.11
DOT6	YER088C	RIB5	P38145	238 aa		1.84	□□□□□ -2.11
DOT6	YER088C	LYS1	P38998	373 aa	RIP-Chip data	1.84	□□□□□ -2.11	RIP-Chip
DOT6	YER088C	YAL037W	P39728	267 aa		1.84	□□□□□ -2.11
DOT6	YER088C	PRM5	P40476	318 aa		1.84	□□□□□ -2.11
DOT6	YER088C	PHO86	P46956	311 aa		1.84	□□□□□ -2.11
DOT6	YER088C	SSN8	P47821	323 aa		1.84	□□□□□ -2.11
DOT6	YER088C	TOM22	P49334	152 aa		1.84	□□□□□ -2.11
DOT6	YER088C	BTN2	P53286	410 aa		1.84	□□□□□ -2.11
DOT6	YER088C	SKO1	Q02100	647 aa		1.84	□□□□□ -2.11
DOT6	YER088C	TAF12	Q03761	539 aa		1.84	□□□□□ -2.11
DOT6	YER088C	DON1	Q05610	365 aa		1.84	□□□□□ -2.11
DOT6	YER088C	FDH1	Q08911	376 aa		1.84	□□□□□ -2.11
DOT6	YER088C	PKH2	Q12236	1081 aa	Known RBP	1.84	□□□□□ -2.11
DOT6	YER088C	YLR108C	Q12259	485 aa		1.84	□□□□□ -2.11
DOT6	YER088C	YDR524C-B	Q3E6R4	66 aa		1.84	□□□□□ -2.11
DOT6	YER088C	TEF1	P02994	458 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	RPS8A	P0CX39	200 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	RPS8B	P0CX40	200 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	VMA2	P16140	517 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	SPO12	P17123	173 aa		1.84	□□□□□ -2.12
DOT6	YER088C	SWD3	P38123	315 aa		1.84	□□□□□ -2.12
DOT6	YER088C	YBL028C	P38202	106 aa		1.84	□□□□□ -2.12
DOT6	YER088C	NOC2	P39744	710 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	YGR210C	P42942	411 aa		1.84	□□□□□ -2.12
DOT6	YER088C	LAM5	P43560	674 aa		1.84	□□□□□ -2.12
DOT6	YER088C	TCB2	P48231	1178 aa		1.84	□□□□□ -2.12
DOT6	YER088C	YGL138C	P53122	345 aa		1.84	□□□□□ -2.12
DOT6	YER088C	ACL4	Q03771	387 aa		1.84	□□□□□ -2.12
DOT6	YER088C	ERB1	Q04660	807 aa	Known RBP	1.84	□□□□□ -2.12
DOT6	YER088C	MMR1	Q06324	491 aa		1.84	□□□□□ -2.12
DOT6	YER088C	SGT1	Q08446	395 aa		1.84	□□□□□ -2.12
DOT6	YER088C	SNU66	Q12420	587 aa	Predicted RBP	1.84	□□□□□ -2.12
DOT6	YER088C	AFI1	Q99222	893 aa		1.84	□□□□□ -2.12
DOT6	YER088C	ADH2	P00331	348 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	CYC3	P06182	269 aa		1.83	□□□□□ -2.12
DOT6	YER088C	CUP1-1	P0CX80	61 aa		1.83	□□□□□ -2.12
DOT6	YER088C	CUP1-2	P0CX81	61 aa		1.83	□□□□□ -2.12
DOT6	YER088C	CLN3	P13365	580 aa		1.83	□□□□□ -2.12
DOT6	YER088C	SLY1	P22213	666 aa		1.83	□□□□□ -2.12
DOT6	YER088C	LDB16	P25587	256 aa		1.83	□□□□□ -2.12
DOT6	YER088C	ERV1	P27882	189 aa		1.83	□□□□□ -2.12
DOT6	YER088C	ARO2	P28777	376 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	DEG1	P31115	442 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	KAR9	P32526	644 aa		1.83	□□□□□ -2.12
DOT6	YER088C	SDH3	P33421	198 aa		1.83	□□□□□ -2.12
DOT6	YER088C	NTC20	P38302	140 aa	Predicted RBP	1.83	□□□□□ -2.12
DOT6	YER088C	MSG5	P38590	489 aa		1.83	□□□□□ -2.12
DOT6	YER088C	NDT80	P38830	627 aa		1.83	□□□□□ -2.12
DOT6	YER088C	PRE5	P40302	234 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	YFL067W	P43537	175 aa		1.83	□□□□□ -2.12
DOT6	YER088C	HMS2	P47175	358 aa		1.83	□□□□□ -2.12
DOT6	YER088C	PPM1	Q04081	328 aa		1.83	□□□□□ -2.12
DOT6	YER088C	SMA2	Q04658	369 aa		1.83	□□□□□ -2.12
DOT6	YER088C	HSP42	Q12329	375 aa		1.83	□□□□□ -2.12
DOT6	YER088C	RIF1	P29539	1916 aa		1.83	□□□□□ -2.12
DOT6	YER088C	HHF1	P02309	103 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	ADE4	P04046	510 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	ARG4	P04076	463 aa	Predicted RBP	1.83	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms