RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W CSF1Q12150 2958 aa1.59□□□□□ -2.15
TRM3YDL112W ILS1P09436 1072 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W ROX1P25042 368 aa1.59□□□□□ -2.15
TRM3YDL112W CPR3P25719 182 aa1.59□□□□□ -2.15
TRM3YDL112W CRM1P30822 1084 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W PTH2P34222 208 aa1.59□□□□□ -2.15
TRM3YDL112W OAR1P35731 278 aa1.59□□□□□ -2.15
TRM3YDL112W YBR139WP38109 508 aa1.59□□□□□ -2.15
TRM3YDL112W EXO84P38261 753 aa1.59□□□□□ -2.15
TRM3YDL112W MUP3P38734 546 aa1.59□□□□□ -2.15
TRM3YDL112W ALK1P43633 760 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W BPL1P48445 690 aaPredicted RBP1.59□□□□□ -2.15
TRM3YDL112W TIM13P53299 105 aa1.59□□□□□ -2.15
TRM3YDL112W MAL13P53338 473 aa1.59□□□□□ -2.15
TRM3YDL112W ATG4P53867 494 aa1.59□□□□□ -2.15
TRM3YDL112W BOP3P53958 396 aa1.59□□□□□ -2.15
TRM3YDL112W DIG1Q03063 452 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W ATG23Q06671 453 aa1.59□□□□□ -2.15
TRM3YDL112W TGS1Q12052 315 aa1.59□□□□□ -2.15
TRM3YDL112W YPR022CQ12139 1133 aa1.59□□□□□ -2.15
TRM3YDL112W RUD3Q12234 484 aaKnown RBP1.59□□□□□ -2.15
TRM3YDL112W ATP2P00830 511 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W SPT3P06844 337 aa1.59□□□□□ -2.16
TRM3YDL112W CDC24P11433 854 aaPredicted RBP1.59□□□□□ -2.16
TRM3YDL112W RED1P14291 827 aa1.59□□□□□ -2.16
TRM3YDL112W CBS2P14905 389 aa1.59□□□□□ -2.16
TRM3YDL112W TYR1P20049 452 aa1.59□□□□□ -2.16
TRM3YDL112W HOP1P20050 605 aa1.59□□□□□ -2.16
TRM3YDL112W URE2P23202 354 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W SPB1P25582 841 aaPredicted RBP1.59□□□□□ -2.16
TRM3YDL112W STP22P25604 385 aa1.59□□□□□ -2.16
TRM3YDL112W YEL043WP32618 956 aa1.59□□□□□ -2.16
TRM3YDL112W MUD2P36084 527 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W PCH2P38126 564 aa1.59□□□□□ -2.16
TRM3YDL112W MSG5P38590 489 aa1.59□□□□□ -2.16
TRM3YDL112W RIX1P38883 763 aaPredicted RBP1.59□□□□□ -2.16
TRM3YDL112W NPT1P39683 429 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W BUD32P53323 261 aa1.59□□□□□ -2.16
TRM3YDL112W RCF2P53721 224 aa1.59□□□□□ -2.16
TRM3YDL112W OSH6Q02201 448 aa1.59□□□□□ -2.16
TRM3YDL112W VAC14Q06708 880 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-LR1P0C2J4 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-FP0CX61 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-GR2P0CX62 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-CP25383 438 aa1.59□□□□□ -2.16
TRM3YDL112W KRE6P32486 720 aa1.59□□□□□ -2.16
TRM3YDL112W RPS1AP33442 255 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W NUP120P35729 1037 aa1.59□□□□□ -2.16
TRM3YDL112W YHI9P38765 294 aa1.59□□□□□ -2.16
TRM3YDL112W RTT107P38850 1070 aa1.59□□□□□ -2.16
TRM3YDL112W MNL1P38888 796 aa1.59□□□□□ -2.16
TRM3YDL112W CCT2P39076 527 aaKnown RBP1.59□□□□□ -2.16
TRM3YDL112W MET18P40469 1032 aa1.59□□□□□ -2.16
TRM3YDL112W CUP9P41817 306 aa1.59□□□□□ -2.16
TRM3YDL112W STB2P46679 850 aa1.59□□□□□ -2.16
TRM3YDL112W NAS6P50086 228 aa1.59□□□□□ -2.16
TRM3YDL112W BOL2P53082 120 aa1.59□□□□□ -2.16
TRM3YDL112W COG2P53271 262 aa1.59□□□□□ -2.16
TRM3YDL112W FHN1P53279 174 aa1.59□□□□□ -2.16
TRM3YDL112W UBX4P54730 416 aa1.59□□□□□ -2.16
TRM3YDL112W YSA1Q01976 231 aa1.59□□□□□ -2.16
TRM3YDL112W FDC1Q03034 503 aa1.59□□□□□ -2.16
TRM3YDL112W NHP10Q03435 203 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-DR2Q03483 438 aa1.59□□□□□ -2.16
TRM3YDL112W YET2Q04210 160 aa1.59□□□□□ -2.16
TRM3YDL112W SML1Q04964 104 aa1.59□□□□□ -2.16
TRM3YDL112W YDR278CQ05612 105 aa1.59□□□□□ -2.16
TRM3YDL112W ENT4Q07872 247 aa1.59□□□□□ -2.16
TRM3YDL112W IZH3Q07959 543 aa1.59□□□□□ -2.16
TRM3YDL112W YOR114WQ12219 294 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-BQ12260 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-OR2Q12293 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-DR1Q12392 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-OR1Q12439 438 aa1.59□□□□□ -2.16
TRM3YDL112W TY2A-DR3Q99303 438 aa1.59□□□□□ -2.16
TRM3YDL112W URA7P28274 579 aaKnown RBP1.58□□□□□ -2.16
TRM3YDL112W LSM5P40089 93 aaKnown RBP1.58□□□□□ -2.16
TRM3YDL112W IRC5P43610 853 aa1.58□□□□□ -2.16
TRM3YDL112W JHD2P47156 728 aaPredicted RBP1.58□□□□□ -2.16
TRM3YDL112W ARO10Q06408 635 aa1.58□□□□□ -2.16
TRM3YDL112W YDL218WQ07629 317 aa1.58□□□□□ -2.16
TRM3YDL112W YOS9Q99220 542 aa1.58□□□□□ -2.16
TRM3YDL112W HSP26P15992 214 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
TRM3YDL112W HEM15P16622 393 aa1.58□□□□□ -2.16
TRM3YDL112W MDM10P18409 493 aa1.58□□□□□ -2.16
TRM3YDL112W YCR099CP25657 155 aa1.58□□□□□ -2.16
TRM3YDL112W YHR210CP38893 341 aa1.58□□□□□ -2.16
TRM3YDL112W UTP18P40362 594 aaPredicted RBP1.58□□□□□ -2.16
TRM3YDL112W CCT7P42943 550 aaKnown RBP1.58□□□□□ -2.16
TRM3YDL112W YGL260WP53056 76 aa1.58□□□□□ -2.16
TRM3YDL112W APM1Q00776 475 aaPredicted RBP1.58□□□□□ -2.16
TRM3YDL112W YDR209CQ03480 137 aa1.58□□□□□ -2.16
TRM3YDL112W VTI1Q04338 217 aa1.58□□□□□ -2.16
TRM3YDL112W NMD4Q12129 218 aa1.58□□□□□ -2.16
TRM3YDL112W STE2D6VTK4 431 aa1.58□□□□□ -2.16
TRM3YDL112W ARD1P07347 238 aaPredicted RBP1.58□□□□□ -2.16
TRM3YDL112W PET122P10355 254 aa1.58□□□□□ -2.16
TRM3YDL112W YCL068CP25593 260 aa1.58□□□□□ -2.16
TRM3YDL112W RRN10P38204 145 aa1.58□□□□□ -2.16
TRM3YDL112W IFA38P38286 347 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 92.3 ms