RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
BRF1-222ENST00000635152 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
BRF1-222ENST00000635152 SCN9AQ15858 1988 aa14.42□□□□□ -0.1
BRF1-222ENST00000635152 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
BRF1-222ENST00000635152 DNAAF5Q86Y56 855 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 GMCL1P1Q8NEA9 526 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 ACER1Q8TDN7 264 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 GMCL1Q96IK5 515 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 RUSC1Q9BVN2 902 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 IKZF4Q9H2S9 585 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 ZBTB39O15060 712 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 CLIC2O15247 247 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 SERPING1P05155 500 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 SLC9A1P19634 815 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 Q4G0T1 1027 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 KIAA1755Q5JYT7 1200 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 SYT2Q8N9I0 419 aaPredicted RBP14.41□□□□□ -0.1
BRF1-222ENST00000635152 IPO4Q8TEX9 1081 aaKnown RBP14.41□□□□□ -0.1
BRF1-222ENST00000635152 MS4A14Q96JA4 679 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 NOX5Q96PH1 765 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 LRRC1Q9BTT6 524 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 PLEKHA4Q9H4M7 779 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.41□□□□□ -0.1
BRF1-222ENST00000635152 HDAC9Q9UKV0 1011 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 ARFGEF1Q9Y6D6 1849 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
BRF1-222ENST00000635152 A0A087X0T9 212 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 SSU72P8A0A1W2PR75 194 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FRMD3A2A2Y4 597 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 CCDC66A2RUB6 948 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 GCNT3O95395 438 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FAM228BP0C875 321 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 HOXD13P35453 343 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 KLHL30Q0D2K2 578 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 KNOP1Q1ED39 458 aaKnown RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 SPATA4Q8NEY3 305 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 PACSIN1Q9BY11 444 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 PACSIN2Q9UNF0 486 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 SMCHD1A6NHR9 2005 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 PPIP5K2O43314 1243 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FTCDO95954 541 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FOSP01100 380 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 POLD1P28340 1107 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FAM193AP78312 1265 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FOXR2Q6PJQ5 311 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 TPH2Q8IWU9 490 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 ARMCX3Q9UH62 379 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 DMGDHQ9UI17 866 aaKnown RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 HYOU1Q9Y4L1 999 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 COL11A2P13942 1736 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 YDJCA8MPS7 323 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 KLRC1P26715 233 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 CASP4P49662 377 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 STAT2P52630 851 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 RNASE9P60153 205 aaKnown RBP14.4□□□□□ -0.1
BRF1-222ENST00000635152 IQCEQ6IPM2 695 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 FAM20AQ96MK3 541 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 TLR10Q9BXR5 811 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 RABGAP1Q9Y3P9 1069 aa14.4□□□□□ -0.1
BRF1-222ENST00000635152 NRXN2Q9P2S2 1712 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 SIPA1L1O43166 1804 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 TBX3O15119 743 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 C21orf2O43822 256 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
BRF1-222ENST00000635152 AKAP3O75969 853 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 HNRNPH2P55795 449 aaKnown RBP14.39□□□□□ -0.11
BRF1-222ENST00000635152 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 EDRF1Q3B7T1 1238 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 MAP9Q49MG5 647 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 KLHDC7AQ5VTJ3 777 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 VAV3Q9UKW4 847 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 FAM170AA1A519 330 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 TARSL2A2RTX5 802 aaKnown RBP14.39□□□□□ -0.11
BRF1-222ENST00000635152 PALMO75781 387 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 MCM3P25205 808 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 HOXA7P31268 230 aaPredicted RBP14.39□□□□□ -0.11
BRF1-222ENST00000635152 MARSP56192 900 aaKnown RBP14.39□□□□□ -0.11
BRF1-222ENST00000635152 PTPROQ16827 1216 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 KSR1Q8IVT5 923 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 BRWD3Q6RI45 1802 aa14.39□□□□□ -0.11
BRF1-222ENST00000635152 PLSCR1O15162 318 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 PJA2O43164 708 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 RAD17O75943 681 aa14.38□□□□□ -0.11
BRF1-222ENST00000635152 XRCC5P13010 732 aaKnown RBP14.38□□□□□ -0.11
BRF1-222ENST00000635152 TCP1P17987 556 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms