RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 CEP55Q53EZ4 464 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 VSTM4Q8IW00 320 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.89
PCDH15-233ENST00000621708 MSTO1Q9BUK6 570 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 MED1Q15648 1581 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-233ENST00000621708 HSPA6P17066 643 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 MAPK6Q16659 721 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 TCP11X2Q5H9J9 407 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 C11orf57Q6ZUT1 292 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-233ENST00000621708 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-233ENST00000621708 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 CARD6Q9BX69 1037 aa9.52□□□□□ -0.89
PCDH15-233ENST00000621708 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.52□□□□□ -0.89
PCDH15-233ENST00000621708 ZNF500O60304 480 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 PPM1FP49593 454 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 SNAP25P60880 206 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ETF1P62495 437 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 NAALADL2Q58DX5 795 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 RNF187Q5TA31 235 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ANKRD13AQ8IZ07 590 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 CCDC63Q8NA47 563 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 DAGLBQ8NCG7 672 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 NDST4Q9H3R1 872 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 TYW1Q9NV66 732 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 GCNT4Q9P109 453 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 CETPP11597 493 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 MTMR2Q13614 643 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 LRRC41Q15345 812 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 NBPF11Q86T75 865 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 P3H4Q92791 437 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 PCDHA10Q9Y5I2 948 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 EYA4O95677 639 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 PDHBP11177 359 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 CASP14P31944 242 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 CBX1P83916 185 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ANGEL2Q5VTE6 544 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 RINT1Q6NUQ1 792 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 C15orf52Q6ZUT6 534 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 GUF1Q8N442 669 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 RDM1Q8NG50 284 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 GGA3Q9NZ52 723 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
PCDH15-233ENST00000621708 MYL3P08590 195 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ERCC3P19447 782 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 HMGCS2P54868 508 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 BRD3Q15059 726 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ARMCX2Q7L311 632 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 SCYL3Q8IZE3 742 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 DYDC2Q96IM9 177 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 SELENOSQ9BQE4 189 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 ODF2LQ9ULJ1 636 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 POTEDQ86YR6 584 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 UBE2Q2Q8WVN8 375 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 RSAD2Q8WXG1 361 aa9.51□□□□□ -0.89
PCDH15-233ENST00000621708 MYO1FO00160 1098 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 ABCB4P21439 1286 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 EFNA5P52803 228 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 PEX3P56589 373 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 EEPD1Q7L9B9 569 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-233ENST00000621708 SLC9A2Q9UBY0 812 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 ITIH3Q06033 890 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 CATSPER4Q7RTX7 472 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 STAG2Q8N3U4 1231 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 MYRIPQ8NFW9 859 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 TSC1Q92574 1164 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 ADARB2Q9NS39 739 aaKnown RBP9.5□□□□□ -0.89
PCDH15-233ENST00000621708 COASYQ13057 564 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 TMEM260Q9NX78 707 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 POLLQ9UGP5 575 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 POTEMA6NI47 508 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 CLIC2O15247 247 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 TFAMQ00059 246 aaKnown RBP9.5□□□□□ -0.89
PCDH15-233ENST00000621708 FAM83AQ86UY5 434 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 PRR12Q9ULL5 1215 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 UBE4BO95155 1302 aa9.5□□□□□ -0.89
PCDH15-233ENST00000621708 CACNB1Q02641 598 aaPredicted RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 SESTD1Q86VW0 696 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 SMAP1Q8IYB5 467 aaPredicted RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 ELOA2Q8IYF1 753 aaPredicted RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 AFAP1L2Q8N4X5 818 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 KATNAL1Q9BW62 490 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 PHBP35232 272 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 ANTXR2P58335 489 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 SFR1Q86XK3 245 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 TTC16Q8NEE8 873 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 RIT2Q99578 217 aa9.49□□□□□ -0.89
PCDH15-233ENST00000621708 PAIP2Q9BPZ3 127 aaKnown RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 EIF2AK1Q9BQI3 630 aaKnown RBP9.49□□□□□ -0.89
PCDH15-233ENST00000621708 ZMYND12Q9H0C1 365 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms