RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
FARP1-230ENST00000600380 PCDHA10Q9Y5I2 948 aa13.34□□□□□ -0.27
FARP1-230ENST00000600380 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
FARP1-230ENST00000600380 TNRC18O15417 2968 aaPredicted RBP13.33□□□□□ -0.28
FARP1-230ENST00000600380 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 ARVCFO00192 962 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 BACH1O14867 736 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 ZBTB39O15060 712 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 CABYRO75952 493 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 CDC25AP30304 524 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 STAT5BP51692 787 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 RTP1P59025 263 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 TLE2Q04725 743 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
FARP1-230ENST00000600380 PLCB4Q15147 1175 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 MIS18BP1Q6P0N0 1132 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
FARP1-230ENST00000600380 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 GLG1Q92896 1179 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 MAFBQ9Y5Q3 323 aaPredicted RBP13.33□□□□□ -0.28
FARP1-230ENST00000600380 EMSYQ7Z589 1322 aa13.33□□□□□ -0.28
FARP1-230ENST00000600380 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 PSAPP07602 524 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 SPATA31C1P0DKV0 1188 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
FARP1-230ENST00000600380 JAK3P52333 1124 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 EPHA7Q15375 998 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 ECM1Q16610 540 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 GDF6Q6KF10 455 aaPredicted RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 EIF2AK1Q9BQI3 630 aaKnown RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 MMTAG2Q9BU76 263 aaKnown RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 TRMT13Q9NUP7 481 aaKnown RBP13.32□□□□□ -0.28
FARP1-230ENST00000600380 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 ATP11BQ9Y2G3 1177 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 SAMM50Q9Y512 469 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 IGSF9BQ9UPX0 1349 aa13.32□□□□□ -0.28
FARP1-230ENST00000600380 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
FARP1-230ENST00000600380 PQBP1O60828 265 aaKnown RBP13.31□□□□□ -0.28
FARP1-230ENST00000600380 MED24O75448 989 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 SLITRK3O94933 977 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 HOXC8P31273 242 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 SFNP31947 248 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 PRPHP41219 470 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
FARP1-230ENST00000600380 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 MARCH8Q5T0T0 291 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 C1orf53Q5VUE5 145 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
FARP1-230ENST00000600380 RDM1Q8NG50 284 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 WNT8BQ93098 351 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 CLIC6Q96NY7 704 aa13.31□□□□□ -0.28
FARP1-230ENST00000600380 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
FARP1-230ENST00000600380 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 B4GALT4O60513 344 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 CD4P01730 458 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
FARP1-230ENST00000600380 INSRRP14616 1297 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 ADAM17P78536 824 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 PRKCEQ02156 737 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 NFRKBQ6P4R8 1299 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 SESTD1Q86VW0 696 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 ATP8B4Q8TF62 1192 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
FARP1-230ENST00000600380 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
FARP1-230ENST00000600380 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 SH2D3AQ9BRG2 576 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 ERAP1Q9NZ08 941 aa13.3□□□□□ -0.28
FARP1-230ENST00000600380 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
FARP1-230ENST00000600380 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
FARP1-230ENST00000600380 LAD1O00515 517 aa13.29□□□□□ -0.28
FARP1-230ENST00000600380 TREHO43280 583 aa13.29□□□□□ -0.28
FARP1-230ENST00000600380 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
FARP1-230ENST00000600380 CYP2C9P11712 490 aa13.29□□□□□ -0.28
FARP1-230ENST00000600380 ITGB8P26012 769 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms