RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
CXXC1-213ENST00000590234 WDR64B1ANS9 1081 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 CHMP2AO43633 222 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 PSMD10O75832 226 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 PSAPP07602 524 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 SLC26A2P50443 739 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 JAK3P52333 1124 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 PPFIA1Q13136 1202 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 SWSAP1Q6NVH7 229 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 SERINC5Q86VE9 423 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 CCDC60Q8IWA6 550 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-213ENST00000590234 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 LMBR1Q8WVP7 490 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 DHX38Q92620 1227 aaKnown RBP16.53■□□□□ 0.24
CXXC1-213ENST00000590234 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
CXXC1-213ENST00000590234 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
CXXC1-213ENST00000590234 TRIP12Q14669 1992 aaPredicted RBP16.52■□□□□ 0.24
CXXC1-213ENST00000590234 TBX3O15119 743 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 TREHO43280 583 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 SFNP31947 248 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 EPHB4P54760 987 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 RBL2Q08999 1139 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 CUL4AQ13619 759 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 GRIK4Q16099 956 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 SCLYQ96I15 445 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 FAM20AQ96MK3 541 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 UNC45AQ9H3U1 944 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 DISC1Q9NRI5 854 aa16.52■□□□□ 0.24
CXXC1-213ENST00000590234 POTEB3A0JP26 581 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 MARCH6O60337 910 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 ADAM17P78536 824 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 SHHQ15465 462 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 C9orf50Q5SZB4 431 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 POTEBQ6S5H4 581 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 RDM1Q8NG50 284 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 WNT8BQ93098 351 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 IL23AQ9NPF7 189 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
CXXC1-213ENST00000590234 RANBP2P49792 3224 aaKnown RBP16.51■□□□□ 0.23
CXXC1-213ENST00000590234 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 RRN3P2A6NIE6 340 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 BAG4O95429 457 aaKnown RBP16.5■□□□□ 0.23
CXXC1-213ENST00000590234 IQCF3P0C7M6 154 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 ACRP10323 421 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 CKBP12277 381 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 INSRRP14616 1297 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 SELPP16109 830 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 RFC2P35250 354 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 IGBP1P78318 339 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
CXXC1-213ENST00000590234 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-213ENST00000590234 B3GNT9Q6UX72 402 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 LRRC8DQ7L1W4 858 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 CKAP2LQ8IYA6 745 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 ATP8B4Q8TF62 1192 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 HAS1Q92839 578 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.233e-7■■□□□ 12.2
CXXC1-213ENST00000590234 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-213ENST00000590234 TRIOBPQ9H2D6 2365 aa16.5■□□□□ 0.23
CXXC1-213ENST00000590234 H3BQV1 296 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 K7ELQ4 463 aaPredicted RBP16.49■□□□□ 0.23
CXXC1-213ENST00000590234 WNT7AO00755 349 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 HBP1O60381 514 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 NEMFO60524 1076 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.236e-8■□□□□ 9.8
CXXC1-213ENST00000590234 THPOP40225 353 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 CALCRLQ16602 461 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
CXXC1-213ENST00000590234 VAV3Q9UKW4 847 aa16.49■□□□□ 0.23
CXXC1-213ENST00000590234 NOL7Q9UMY1 257 aaKnown RBP16.49■□□□□ 0.23
CXXC1-213ENST00000590234 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
CXXC1-213ENST00000590234 SCN5AQ14524 2016 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 MBLAC1A4D2B0 266 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-213ENST00000590234 CAND2O75155 1236 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 PARNO95453 639 aaKnown RBP16.48■□□□□ 0.23
CXXC1-213ENST00000590234 PFKMP08237 780 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 ATP4AP20648 1035 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 MCM7P33993 719 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 TMEM240Q5SV17 173 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 MARCH8Q5T0T0 291 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
CXXC1-213ENST00000590234 TAF2Q6P1X5 1199 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms