RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 TRIM60Q495X7 471 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 B3GNT9Q6UX72 402 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 CKAP2LQ8IYA6 745 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
GHDC-209ENST00000588762 PCYT2Q99447 389 aa17.47■□□□□ 0.39
GHDC-209ENST00000588762 PQBP1O60828 265 aaKnown RBP17.46■□□□□ 0.39
GHDC-209ENST00000588762 MARK3P27448 753 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 PRPHP41219 470 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 MLLT1Q03111 559 aaPredicted RBP17.46■□□□□ 0.39
GHDC-209ENST00000588762 TLE2Q04725 743 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 PKP1Q13835 747 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
GHDC-209ENST00000588762 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 ZNF396Q96N95 335 aaPredicted RBP17.46■□□□□ 0.39
GHDC-209ENST00000588762 RAB34Q9BZG1 259 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
GHDC-209ENST00000588762 EML1O00423 815 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 TECP42680 631 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 ATP2C1P98194 919 aaPredicted RBP17.45■□□□□ 0.38
GHDC-209ENST00000588762 SPIRE1Q08AE8 756 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 EPHA7Q15375 998 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
GHDC-209ENST00000588762 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 PPP1R13LQ8WUF5 828 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 TOX2Q96NM4 488 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 TRPC6Q9Y210 931 aa17.45■□□□□ 0.38
GHDC-209ENST00000588762 MAFBQ9Y5Q3 323 aaPredicted RBP17.45■□□□□ 0.38
GHDC-209ENST00000588762 DKC1O60832 514 aaKnown RBP eCLIP17.44■□□□□ 0.38
GHDC-209ENST00000588762 BRD1O95696 1058 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 SMIM10L2AP0DMW4 78 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 SMIM10L2BP0DMW5 78 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 GNAT1P11488 350 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
GHDC-209ENST00000588762 ARL6IP4Q66PJ3 421 aaKnown RBP17.44■□□□□ 0.38
GHDC-209ENST00000588762 C7orf61Q8IZ16 206 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 FAM167AQ96KS9 214 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 RBM19Q9Y4C8 960 aaKnown RBP17.44■□□□□ 0.38
GHDC-209ENST00000588762 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 IGSF9BQ9UPX0 1349 aa17.44■□□□□ 0.38
GHDC-209ENST00000588762 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 C17orf102A2RUQ5 167 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 P4HBP07237 508 aaKnown RBP17.43■□□□□ 0.38
GHDC-209ENST00000588762 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
GHDC-209ENST00000588762 PSMC5P62195 406 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 NUCB2P80303 420 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
GHDC-209ENST00000588762 PDIA5Q14554 519 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 PLCB4Q15147 1175 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 FAM126BQ8IXS8 530 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 ERMNQ8TAM6 284 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 LRWD1Q9UFC0 647 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 CLIC4Q9Y696 253 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
GHDC-209ENST00000588762 TNRC18O15417 2968 aaPredicted RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 POTEMA6NI47 508 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 HBP1O60381 514 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 B4GALT4O60513 344 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 CLTBP09497 229 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 PTGISQ16647 500 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 UGCGQ16739 394 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 FOXD4L6Q3SYB3 417 aaPredicted RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 GDF6Q6KF10 455 aaPredicted RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 FOXD4L3Q6VB84 417 aaPredicted RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
GHDC-209ENST00000588762 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
GHDC-209ENST00000588762 NRBP2Q9NSY0 501 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 STK24Q9Y6E0 443 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 TCHHQ07283 1943 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 EVPLQ92817 2033 aa17.42■□□□□ 0.38
GHDC-209ENST00000588762 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 RRN3P2A6NIE6 340 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 ZNF862O60290 1169 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 CD4P01730 458 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 OATP04181 439 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 INSRRP14616 1297 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 PRKCEQ02156 737 aa17.41■□□□□ 0.38
GHDC-209ENST00000588762 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms