RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 SERPINA10Q9UK55 444 aa8.23□□□□□ -1.09
TVP23C-208ENST00000581273 LHX6Q9UPM6 363 aa8.23□□□□□ -1.09
TVP23C-208ENST00000581273 LUC7L2Q9Y383 392 aaKnown RBP8.23□□□□□ -1.09
TVP23C-208ENST00000581273 HYOU1Q9Y4L1 999 aa8.23□□□□□ -1.09
TVP23C-208ENST00000581273 COL2A1P02458 1487 aaPredicted RBP8.23□□□□□ -1.09
TVP23C-208ENST00000581273 ZDBF2Q9HCK1 2354 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 KLF18A0A0U1RQI7 1052 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GMNCA6NCL1 334 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 BTBD19C9JJ37 291 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 FLOT1O75955 427 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 KRT37O76014 449 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 SGPL1O95470 568 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 TFRCP02786 760 aaKnown RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 PECAM1P16284 738 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 PTPREP23469 700 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GRK4P32298 578 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 KRT9P35527 623 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 LACTBP83111 547 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GOLGA8FQ08AF8 430 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GOLGA8DPQ0D2H9 430 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MTF1Q14872 753 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GRIK5Q16478 980 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 IFI16Q16666 785 aaKnown RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 NCAPH2Q6IBW4 605 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 C6orf89Q6UWU4 347 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 EP400NLQ6ZTU2 488 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 SDCCAG8Q86SQ7 713 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MFN1Q8IWA4 741 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 FUKQ8N0W3 1084 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 SPATA20Q8TB22 786 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 ATRIPQ8WXE1 791 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 CUL5Q93034 780 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 ATP6V1G3Q96LB4 118 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 WRNIP1Q96S55 665 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MMS19Q96T76 1030 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 NOP53Q9NZM5 478 aaKnown RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 STIM2Q9P246 746 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MAGEC2Q9UBF1 373 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 CPA4Q9UI42 421 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 CORO1CQ9ULV4 474 aaPredicted RBP8.22□□□□□ -1.09
TVP23C-208ENST00000581273 GUCA1BQ9UMX6 200 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 SAMM50Q9Y512 469 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MROH7-TTC4A0A0A0MT08 1334 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 FAM205AQ6ZU69 1335 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 DOCK3Q8IZD9 2030 aa8.22□□□□□ -1.09
TVP23C-208ENST00000581273 MGAMO43451 1857 aa8.21□□□□□ -1.09
TVP23C-208ENST00000581273 CFAP54Q96N23 3096 aa8.21□□□□□ -1.09
TVP23C-208ENST00000581273 MYH13Q9UKX3 1938 aa8.21□□□□□ -1.09
TVP23C-208ENST00000581273 GRID2IPA4D2P6 1211 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 C5orf60A6NFR6 353 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 MGRN1O60291 552 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 TLR2O60603 784 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 IDEP14735 1019 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 FERP16591 822 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 XBP1P17861 261 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 PAX7P23759 505 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 EEF1GP26641 437 aaKnown RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 MARCKSP29966 332 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 PSMC4P43686 418 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 IFT88Q13099 833 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 PDCLQ13371 301 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 SNAPC2Q13487 334 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 TTF1Q15361 905 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 SKIDA1Q1XH10 827 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 LONRF3Q496Y0 759 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 C6orf132Q5T0Z8 1188 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 AGBL2Q5U5Z8 902 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 NAIF1Q69YI7 327 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 KRT40Q6A162 431 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 CAPRIN2Q6IMN6 1127 aaKnown RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 MIGA2Q7L4E1 593 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 ERO1BQ86YB8 467 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 FAM114A1Q8IWE2 563 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 GBP7Q8N8V2 638 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 CCDC26Q8TAB7 109 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 RAET1EQ8TD07 263 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 ZNF483Q8TF39 744 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 CPLX3Q8WVH0 158 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 FERMT2Q96AC1 680 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 TMEM87BQ96K49 555 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 FAM84BQ96KN1 310 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 SCLT1Q96NL6 688 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 MAP3K14Q99558 947 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 SLF1Q9BQI6 1058 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 ADAM33Q9BZ11 813 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 PUS3Q9BZE2 481 aaKnown RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 NSRP1Q9H0G5 558 aaKnown RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 FOXP1Q9H334 677 aaPredicted RBP8.21□□□□□ -1.1
TVP23C-208ENST00000581273 EBF2Q9HAK2 575 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 TMOD2Q9NZR1 351 aa8.21□□□□□ -1.1
TVP23C-208ENST00000581273 DDX20Q9UHI6 824 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms