RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 LDHDQ86WU2 507 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 SP8Q8IXZ3 490 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 NLGN4XQ8N0W4 816 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 USP33Q8TEY7 942 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 JDP2Q8WYK2 163 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 TSPAN17Q96FV3 270 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 CCDC136Q96JN2 1154 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 BOCQ9BWV1 1114 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 FAM126AQ9BYI3 521 aaPredicted RBP5.97□□□□□ -1.45
CASC4-206ENST00000558847 RXFP1Q9HBX9 757 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 BTG4Q9NY30 223 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 WASHC2CQ9Y4E1 1318 aa5.97□□□□□ -1.45
CASC4-206ENST00000558847 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 SLC12A8A0AV02 714 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 PTPDC1A2A3K4 754 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 C22orf46C9J442 243 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 H7C1D1 291 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 NEMP1O14524 444 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 NTRK1P04629 796 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 CELA3BP08861 270 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 NCKAP1LP55160 1127 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 EVA1CP58658 441 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 PRR5P85299 388 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 TMPRSS15P98073 1019 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 ZNF200P98182 395 aaPredicted RBP5.96□□□□□ -1.46
CASC4-206ENST00000558847 FAM50AQ14320 339 aaKnown RBP5.96□□□□□ -1.46
CASC4-206ENST00000558847 ZNF174Q15697 407 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 ATP13A4Q4VNC1 1196 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 ZC3H14Q6PJT7 736 aaKnown RBP5.96□□□□□ -1.46
CASC4-206ENST00000558847 DBX2Q6ZNG2 339 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 OTOP1Q7RTM1 612 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 PRRT2Q7Z6L0 340 aaPredicted RBP5.96□□□□□ -1.46
CASC4-206ENST00000558847 FAM129CQ86XR2 697 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 EFHBQ8N7U6 833 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 PWWP2AQ96N64 755 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 KCNJ15Q99712 375 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 MENTQ9BUN1 341 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 EPB41L4AQ9HCS5 686 aaPredicted RBP5.96□□□□□ -1.46
CASC4-206ENST00000558847 SIT1Q9Y3P8 196 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 PCDHA5Q9Y5H7 936 aa5.96□□□□□ -1.46
CASC4-206ENST00000558847 F8W031 263 aaPredicted RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 TRAF5O00463 557 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 BUB1BO60566 1050 aaPredicted RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 HIP1RO75146 1068 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 ALDH1L1O75891 902 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 SLC6A11P48066 632 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 SESN3P58005 492 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 ITKQ08881 620 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 IQSEC1Q6DN90 963 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 HHIPL2Q6UWX4 724 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 NOL8Q76FK4 1167 aaKnown RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 DCP2Q8IU60 420 aaKnown RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 IGDCC3Q8IVU1 814 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 TMEFF1Q8IYR6 380 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 CISD2Q8N5K1 135 aaKnown RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 SYT8Q8NBV8 401 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 THG1LQ9NWX6 298 aaKnown RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 PPARGC1AQ9UBK2 798 aaKnown RBP5.95□□□□□ -1.46
CASC4-206ENST00000558847 JAG2Q9Y219 1238 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 IRS2Q9Y4H2 1338 aa5.95□□□□□ -1.46
CASC4-206ENST00000558847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.94□□□□□ -1.46
CASC4-206ENST00000558847 E2F8A0AVK6 867 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 ZNF891A8MT65 544 aaPredicted RBP5.94□□□□□ -1.46
CASC4-206ENST00000558847 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 K7ESF4 209 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 PDE6AP16499 860 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 IGFBP6P24592 240 aaPredicted RBP5.94□□□□□ -1.46
CASC4-206ENST00000558847 GJA4P35212 333 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 ADCYAP1R1P41586 468 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 FIGNQ5HY92 759 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
CASC4-206ENST00000558847 OTOP3Q7RTS5 596 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 NXPE1Q8N323 547 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 PHOSPHO1Q8TCT1 267 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 PEX11GQ96HA9 241 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 GPR101Q96P66 508 aaPredicted RBP5.94□□□□□ -1.46
CASC4-206ENST00000558847 AP5M1Q9H0R1 490 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 ADAM7Q9H2U9 754 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 PCIF1Q9H4Z3 704 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 SLC6A20Q9NP91 592 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 CBLCQ9ULV8 474 aa5.94□□□□□ -1.46
CASC4-206ENST00000558847 SGSM2O43147 1006 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 KATNA1O75449 491 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 ATP2A2P16615 1042 aaKnown RBP5.93□□□□□ -1.46
CASC4-206ENST00000558847 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
CASC4-206ENST00000558847 EMC4Q5J8M3 183 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 SYDE2Q5VT97 1194 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 ARHGAP36Q6ZRI8 547 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 TRIM48Q8IWZ4 208 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 ZZZ3Q8IYH5 903 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 LINC01356Q8N9X3 169 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 ASPSCR1Q9BZE9 553 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 BCAS3Q9H6U6 928 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 EMC7Q9NPA0 242 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 ACSS2Q9NR19 701 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 NUDT5Q9UKK9 219 aa5.93□□□□□ -1.46
CASC4-206ENST00000558847 G3BP2Q9UN86 482 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms