RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 NAP1L1P55209 391 aaKnown RBP21.27■■□□□ 1
FOXN3-214ENST00000557258 LRCH2Q5VUJ6 765 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 BTNL9Q6UXG8 535 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 CPXCR1Q8N123 301 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 CAGE1Q8TC20 777 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 FAM151AQ8WW52 585 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 ABCB6Q9NP58 842 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 WRAP73Q9P2S5 460 aaPredicted RBP21.27■■□□□ 1
FOXN3-214ENST00000557258 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
FOXN3-214ENST00000557258 FOSP01100 380 aaPredicted RBP21.26■□□□□ 0.99
FOXN3-214ENST00000557258 ARP10275 920 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 PLS1Q14651 629 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 WHAMMP3Q1A5X7 153 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 PDXDC1Q6P996 788 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 ZNF771Q7L3S4 317 aaPredicted RBP21.26■□□□□ 0.99
FOXN3-214ENST00000557258 FAM133AQ8N9E0 248 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 SYT2Q8N9I0 419 aaPredicted RBP21.26■□□□□ 0.99
FOXN3-214ENST00000557258 GOPCQ9HD26 462 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 NMT1P30419 496 aaKnown RBP21.26■□□□□ 0.99
FOXN3-214ENST00000557258 POTEAQ6S8J7 498 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.26■□□□□ 0.995e-6■■■■□ 25.3
FOXN3-214ENST00000557258 FUT8Q9BYC5 575 aa21.26■□□□□ 0.99
FOXN3-214ENST00000557258 SLC9A1P19634 815 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 KCNH2Q12809 1159 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 PTPROQ16827 1216 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 TRIM59Q8IWR1 403 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 GSPT2Q8IYD1 628 aaKnown RBP21.25■□□□□ 0.99
FOXN3-214ENST00000557258 GMLQ99445 158 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 HDAC9Q9UKV0 1011 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 GCOM1H8Y6P7 765 aaPredicted RBP21.25■□□□□ 0.99
FOXN3-214ENST00000557258 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
FOXN3-214ENST00000557258 POLR2MP0CAP2 368 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 KCNA3P22001 575 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 MATR3P43243 847 aaKnown RBP eCLIP21.25■□□□□ 0.999e-7■■■□□ 17.4
FOXN3-214ENST00000557258 SPDYE2Q495Y8 402 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 TBC1D10BQ4KMP7 808 aaPredicted RBP21.25■□□□□ 0.99
FOXN3-214ENST00000557258 HGSNATQ68CP4 663 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 COG1Q8WTW3 980 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 PCDHB13Q9Y5F0 798 aa21.25■□□□□ 0.99
FOXN3-214ENST00000557258 TBCAO75347 108 aaKnown RBP21.24■□□□□ 0.99
FOXN3-214ENST00000557258 AKAP3O75969 853 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 C2orf54Q08AI8 447 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 COG2Q14746 738 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 MOXD1Q6UVY6 613 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 BANK1Q8NDB2 785 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 FAM20AQ96MK3 541 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 ZNF341Q9BYN7 854 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 FZD1Q9UP38 647 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 INPP5BP32019 993 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 MAGEA1P43355 309 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 KCTD19Q17RG1 926 aaPredicted RBP21.24■□□□□ 0.99
FOXN3-214ENST00000557258 OTOP1Q7RTM1 612 aa21.24■□□□□ 0.99
FOXN3-214ENST00000557258 MYH10P35580 1976 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 FRMD3A2A2Y4 597 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 CETN3O15182 167 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 GAS7O60861 476 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 SLITRK3O94933 977 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 KNOP1Q1ED39 458 aaKnown RBP21.23■□□□□ 0.99
FOXN3-214ENST00000557258 LDHDQ86WU2 507 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 SH2D4AQ9H788 454 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 ASTN2O75129 1339 aaPredicted RBP21.23■□□□□ 0.99
FOXN3-214ENST00000557258 WNT10BO00744 389 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 MMP14P50281 582 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 CXCL9Q07325 125 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 TERF2Q15554 542 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 MYCT1Q8N699 235 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 PACSIN1Q9BY11 444 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 PLEKHA4Q9H4M7 779 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 VCPKMTQ9H867 229 aa21.23■□□□□ 0.99
FOXN3-214ENST00000557258 ERICH4A6NGS2 130 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 NFIBO00712 420 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 TBX3O15119 743 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 HNRNPH3P31942 346 aaKnown RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 CIITAP33076 1130 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 SFMBT2Q5VUG0 894 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 GJB7Q6PEY0 223 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 RGS17Q9UGC6 210 aaPredicted RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 CCDC151A5D8V7 595 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 OAS2P29728 719 aaKnown RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 SMC1AQ14683 1233 aaKnown RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 ZNF577Q9BSK1 485 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 ADAMTS1Q9UHI8 967 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 CAP2P40123 477 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 PAPD7Q5XG87 772 aaKnown RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 CEP63Q96MT8 703 aa21.22■□□□□ 0.99
FOXN3-214ENST00000557258 PURBQ96QR8 312 aaKnown RBP21.22■□□□□ 0.99
FOXN3-214ENST00000557258 ASTN1O14525 1302 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 USO1O60763 962 aaKnown RBP21.21■□□□□ 0.99
FOXN3-214ENST00000557258 CDK17Q00537 523 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 BEND6Q5SZJ8 279 aaPredicted RBP21.21■□□□□ 0.99
FOXN3-214ENST00000557258 NIM1KQ8IY84 436 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 RTKN2Q8IZC4 609 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 HSD17B14Q9BPX1 270 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 UNC45AQ9H3U1 944 aa21.21■□□□□ 0.99
FOXN3-214ENST00000557258 CEP72Q9P209 647 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms